NZ_CP041392611446..623120

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP041392        Location: 611446..623120         Organism: Escherichia coli strain ECOL-18-VL-LA-PA-Ryan-0026       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3Z24_RS02945 () 606447..606881 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
E3Z24_RS02950 () 606899..607777 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
E3Z24_RS02955 () 607767..608546 - 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
E3Z24_RS02960 () 608557..609030 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
E3Z24_RS02965 () 609053..610333 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
E3Z24_RS02970 () 610582..611391 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
E3Z24_RS02975 () 611446..611910 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
E3Z24_RS02980 () 611910..612245 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
E3Z24_RS02985 () 612394..613965 - 1572 WP_001273752.1 galactarate dehydratase -
E3Z24_RS02990 () 614340..615674 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
E3Z24_RS02995 () 615690..616460 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
E3Z24_RS03000 () 616490..617380 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
E3Z24_RS03005 () 617477..618622 + 1146 WP_001300387.1 glycerate 2-kinase -
E3Z24_RS03015 () 619645..620832 - 1188 WP_000484594.1 YhaC family protein -
E3Z24_RS03020 () 620854..621393 - 540 WP_000675733.1 hypothetical protein -
E3Z24_RS25485 () 621649..621867 - 219 WP_001301311.1 transcriptional activator TdcR -
E3Z24_RS03030 () 622182..623120 + 939 WP_000104207.1 transcriptional regulator TdcA -
E3Z24_RS03035 () 623219..624208 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
E3Z24_RS03040 () 624230..625561 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
E3Z24_RS03045 () 625587..626795 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.009
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001