MGE detailed information
MGE type: Genomic_island MGE length: 12799 bp
Accession: NZ_CP029687 Location: 618076..630874 Organism: Escherichia coli strain E706 Replicon: chromosome
Accession: NZ_CP029687 Location: 618076..630874 Organism: Escherichia coli strain E706 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DMI84_RS03290 () | 613421..615457 | - | 2037 | WP_000249100.1 | penicillin-binding protein activator LpoA | - |
| DMI84_RS03295 () | 615522..616382 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DMI84_RS03300 () | 616425..617516 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| DMI84_RS03305 () | 617527..617985 | - | 459 | Protein_599 | fimbria/pilus outer membrane usher protein | - |
| DMI84_RS03310 () | 618076..619304 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| DMI84_RS03315 () | 619275..619664 | - | 390 | WP_063120790.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| DMI84_RS03320 () | 619664..619999 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| DMI84_RS03325 () | 620148..621719 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| DMI84_RS03330 () | 622094..623428 | + | 1335 | WP_118014614.1 | galactarate/glucarate/glycerate transporter GarP | - |
| DMI84_RS03335 () | 623444..624214 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| DMI84_RS03340 () | 624244..625134 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| DMI84_RS03345 () | 625231..626376 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| DMI84_RS03355 () | 627399..628586 | - | 1188 | WP_063120788.1 | YhaC family protein | - |
| DMI84_RS03360 () | 628608..629147 | - | 540 | WP_118014617.1 | hypothetical protein | - |
| DMI84_RS26280 () | 629403..629621 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| DMI84_RS03370 () | 629936..630874 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| DMI84_RS03380 () | 630973..631962 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| DMI84_RS03385 () | 631984..633315 | + | 1332 | WP_118014621.1 | threonine/serine transporter TdcC | - |
| DMI84_RS03390 () | 633341..634549 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.003 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.003 |