NZ_CP0291154211941..4221888

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP029115        Location: 4211941..4221888         Organism: Escherichia coli strain AR435       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSC22_RS22390 () 4207773..4209104 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
CSC22_RS22395 () 4209126..4210115 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
CSC22_RS22405 () 4210214..4211152 - 939 WP_000104207.1 transcriptional regulator TdcA -
CSC22_RS28845 () 4211467..4211685 + 219 WP_001301311.1 transcriptional activator TdcR -
CSC22_RS22415 () 4211941..4212480 + 540 WP_000675733.1 hypothetical protein -
CSC22_RS22420 () 4212502..4213689 + 1188 WP_000484594.1 YhaC family protein -
CSC22_RS22430 () 4214712..4215857 - 1146 WP_001300387.1 glycerate 2-kinase -
CSC22_RS22435 () 4215954..4216844 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
CSC22_RS22440 () 4216874..4217644 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
CSC22_RS22445 () 4217660..4218994 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
CSC22_RS22450 () 4219369..4220940 + 1572 WP_001273752.1 galactarate dehydratase -
CSC22_RS22455 () 4221089..4221424 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
CSC22_RS22460 () 4221424..4221888 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
CSC22_RS22465 () 4221943..4222752 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
CSC22_RS22475 () 4223001..4224281 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
CSC22_RS22480 () 4224304..4224777 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
CSC22_RS22485 () 4224788..4225567 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
CSC22_RS22490 () 4225557..4226435 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
CSC22_RS22495 () 4226453..4226887 + 435 WP_000948824.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005