MGE detailed information
MGE type: Genomic_island MGE length: 10857 bp
Accession: NZ_CP028748 Location: 4096230..4107086 Organism: Escherichia coli strain A27 Replicon: chromosome
Accession: NZ_CP028748 Location: 4096230..4107086 Organism: Escherichia coli strain A27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY80_RS19680 (4091735) | 4091735..4092943 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| AOY80_RS19685 (4092969) | 4092969..4094300 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| AOY80_RS19690 (4094322) | 4094322..4095311 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| AOY80_RS19695 (4095410) | 4095410..4096349 | - | 940 | Protein_3843 | transcriptional regulator TdcA | - |
| AOY80_RS19700 (4096664) | 4096664..4096882 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| AOY80_RS19705 (4097139) | 4097139..4097678 | + | 540 | WP_000675733.1 | protein YhaB | - |
| AOY80_RS19710 (4097700) | 4097700..4098887 | + | 1188 | WP_000484598.1 | YhaC family protein | - |
| AOY80_RS19720 (4099910) | 4099910..4101055 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| AOY80_RS19725 (4101152) | 4101152..4102042 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AOY80_RS19730 (4102072) | 4102072..4102842 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AOY80_RS19735 (4102858) | 4102858..4104192 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| AOY80_RS19740 (4104567) | 4104567..4106138 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| AOY80_RS19745 (4106287) | 4106287..4106622 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| AOY80_RS19750 (4106622) | 4106622..4107086 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| AOY80_RS19755 (4107141) | 4107141..4107950 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| AOY80_RS19760 (4108199) | 4108199..4109479 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| AOY80_RS19765 (4109502) | 4109502..4109975 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| AOY80_RS19770 (4109986) | 4109986..4110765 | + | 780 | WP_000406209.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| AOY80_RS19775 (4110755) | 4110755..4111633 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| AOY80_RS19780 (4111651) | 4111651..4112085 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.003 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.003 |