NZ_CP0287324202228..4212175

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP028732        Location: 4202228..4212175         Organism: Escherichia coli strain H3       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AOY60_RS20395 (4198060) 4198060..4199391 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
AOY60_RS20400 (4199413) 4199413..4200402 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
AOY60_RS20405 (4200501) 4200501..4201439 - 939 WP_000104211.1 transcriptional regulator TdcA -
AOY60_RS20410 (4201754) 4201754..4201972 + 219 WP_001301311.1 transcriptional activator TdcR -
AOY60_RS20415 (4202228) 4202228..4202767 + 540 WP_000675733.1 protein YhaB -
AOY60_RS20420 (4202789) 4202789..4203976 + 1188 WP_201473038.1 YhaC family protein -
AOY60_RS20430 (4204999) 4204999..4206144 - 1146 WP_001300387.1 glycerate 2-kinase -
AOY60_RS20435 (4206241) 4206241..4207131 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
AOY60_RS20440 (4207161) 4207161..4207931 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
AOY60_RS20445 (4207947) 4207947..4209281 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
AOY60_RS20450 (4209656) 4209656..4211227 + 1572 WP_001273753.1 galactarate dehydratase -
AOY60_RS20455 (4211376) 4211376..4211711 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
AOY60_RS20460 (4211711) 4211711..4212175 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
AOY60_RS20465 (4212230) 4212230..4213039 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
AOY60_RS20470 (4213288) 4213288..4214568 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
AOY60_RS20475 (4214591) 4214591..4215064 + 474 WP_001422480.1 PTS N-acetylgalactosamine transporter subunit IIB -
AOY60_RS20480 (4215075) 4215075..4215854 + 780 WP_000406209.1 PTS N-acetylgalactosamine transporter subunit IIC -
AOY60_RS20485 (4215844) 4215844..4216722 + 879 WP_001295548.1 PTS N-acetylgalactosamine transporter subunit IID -
AOY60_RS20490 (4216740) 4216740..4217174 + 435 WP_000948824.1 PTS galactosamine/N-acetylgalactosamine transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005