MGE detailed information
MGE type: Genomic_island MGE length: 9820 bp
Accession: NZ_CP025913 Location: 517618..527437 Organism: Escherichia coli strain 203740 Replicon: chromosome
Accession: NZ_CP025913 Location: 517618..527437 Organism: Escherichia coli strain 203740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CXW72_RS02510 () | 513450..514781 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
CXW72_RS02515 () | 514803..515792 | - | 990 | WP_024237686.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
CXW72_RS02520 () | 515891..516829 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
CXW72_RS25545 () | 517144..517362 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
CXW72_RS02530 () | 517618..518157 | + | 540 | WP_000675733.1 | hypothetical protein | - |
CXW72_RS02535 () | 518179..519366 | + | 1188 | WP_126123245.1 | YhaC family protein | - |
CXW72_RS02545 () | 520276..521421 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
CXW72_RS02550 () | 521518..522408 | - | 891 | WP_024170646.1 | 2-hydroxy-3-oxopropionate reductase | - |
CXW72_RS02555 () | 522438..523208 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
CXW72_RS02560 () | 523224..524543 | - | 1320 | WP_001735763.1 | galactarate/glucarate/glycerate transporter GarP | - |
CXW72_RS02565 () | 524918..526489 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
CXW72_RS02570 () | 526638..526973 | + | 336 | WP_005762317.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
CXW72_RS02575 () | 526973..527437 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
CXW72_RS02580 () | 527492..528301 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
CXW72_RS02585 () | 528550..529830 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
CXW72_RS02590 () | 529853..530326 | + | 474 | WP_001735764.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
CXW72_RS02595 () | 530337..531116 | + | 780 | WP_000406208.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
CXW72_RS02600 () | 531106..531984 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
CXW72_RS02605 () | 532002..532436 | + | 435 | WP_000948842.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.006 | |
Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.002 | |
Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.006 | |
Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.009 | |
Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.002 | |
Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.002 | |
Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.002 | |
Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.002 | |
Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.002 | |
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.006 | |
Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.006 | |
Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.002 | |
Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.006 |