NZ_CP0113423243670..3253504

MGE detailed information

MGE type: Genomic_island        MGE length: 9835 bp
Accession: NZ_CP011342        Location: 3243670..3253504         Organism: Escherichia coli K-12 substr. GM4792       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
U068_RS16060 () 3239502..3240833 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
U068_RS16065 () 3240855..3241844 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
U068_RS16070 () 3241943..3242881 - 939 WP_000104211.1 transcriptional regulator TdcA -
U068_RS25865 () 3243196..3243414 + 219 WP_001301311.1 transcriptional activator TdcR -
U068_RS16080 () 3243670..3244209 + 540 WP_000675733.1 hypothetical protein -
U068_RS16085 () 3244231..3245418 + 1188 WP_000484600.1 YhaC family protein -
U068_RS16095 () 3246328..3247473 - 1146 WP_001300387.1 glycerate 2-kinase -
U068_RS16100 () 3247570..3248460 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
U068_RS16105 () 3248490..3249260 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
U068_RS16110 () 3249276..3250610 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
U068_RS16115 () 3250985..3252556 + 1572 WP_001273753.1 galactarate dehydratase -
U068_RS16120 () 3252705..3253040 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
U068_RS16125 () 3253040..3253504 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
U068_RS16130 () 3253559..3254368 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
U068_RS16135 () 3254617..3255897 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
U068_RS16140 () 3255920..3256393 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
U068_RS16145 () 3256404..3256775 + 372 Protein_3087 PTS sugar transporter subunit IIC -
U068_RS16150 () 3256771..3257328 + 558 Protein_3088 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004