NZ_CP0101433695326..3705272

MGE detailed information

MGE type: Genomic_island        MGE length: 9947 bp
Accession: NZ_CP010143        Location: 3695326..3705272         Organism: Escherichia coli strain D4       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RG37_RS19355 () 3691158..3692489 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
RG37_RS19360 () 3692511..3693500 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
RG37_RS19365 () 3693599..3694537 - 939 WP_000104211.1 transcriptional regulator TdcA -
RG37_RS27345 () 3694852..3695070 + 219 WP_001301311.1 transcriptional activator TdcR -
RG37_RS19375 () 3695326..3695865 + 540 WP_000675733.1 hypothetical protein -
RG37_RS19380 () 3695887..3697074 + 1188 WP_001774050.1 YhaC family protein -
RG37_RS19390 () 3698096..3699241 - 1146 WP_001300387.1 glycerate 2-kinase -
RG37_RS19395 () 3699338..3700228 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
RG37_RS19400 () 3700258..3701028 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
RG37_RS19405 () 3701044..3702378 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
RG37_RS19410 () 3702753..3704324 + 1572 WP_001273753.1 galactarate dehydratase -
RG37_RS19415 () 3704473..3704808 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
RG37_RS19420 () 3704808..3705272 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
RG37_RS19425 () 3705327..3706136 - 810 WP_047600733.1 aga operon transcriptional regulator AgaR -
RG37_RS19435 () 3706385..3707665 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
RG37_RS19440 () 3707688..3708161 + 474 WP_073503457.1 PTS N-acetylgalactosamine transporter subunit IIB -
RG37_RS19445 () 3708172..3708951 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
RG37_RS19450 () 3708941..3709819 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
RG37_RS19455 () 3709837..3710271 + 435 WP_073503458.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005