MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_AP027408 Location: 3945135..3956704 Organism: Escherichia coli strain EC507 isolate EC507 Replicon: chromosome
Accession: NZ_AP027408 Location: 3945135..3956704 Organism: Escherichia coli strain EC507 isolate EC507 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE45_RS20630 (3941460) | 3941460..3942668 | - | 1209 | WP_001300401.1 | propionate kinase | - |
| QUE45_RS20635 (3942694) | 3942694..3944025 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| QUE45_RS20640 (3944047) | 3944047..3945036 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| QUE45_RS20645 (3945135) | 3945135..3946073 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| QUE45_RS20650 (3946388) | 3946388..3946606 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| QUE45_RS20655 (3946862) | 3946862..3947401 | + | 540 | WP_000675733.1 | protein YhaB | - |
| QUE45_RS20660 (3947423) | 3947423..3948611 | + | 1189 | Protein_3827 | YhaC family protein | - |
| QUE45_RS20670 (3949528) | 3949528..3950673 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| QUE45_RS20675 (3950770) | 3950770..3951660 | - | 891 | WP_113368211.1 | 2-hydroxy-3-oxopropionate reductase | - |
| QUE45_RS20680 (3951690) | 3951690..3952460 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| QUE45_RS20685 (3952476) | 3952476..3953810 | - | 1335 | WP_124037368.1 | galactarate/glucarate/glycerate transporter GarP | - |
| QUE45_RS20690 (3954185) | 3954185..3955756 | + | 1572 | WP_032181387.1 | galactarate dehydratase | - |
| QUE45_RS20695 (3955905) | 3955905..3956240 | + | 336 | WP_001308975.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| QUE45_RS20700 (3956240) | 3956240..3956704 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| QUE45_RS20705 (3956759) | 3956759..3957568 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| QUE45_RS20710 (3957817) | 3957817..3959097 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| QUE45_RS20715 (3959120) | 3959120..3959593 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| QUE45_RS20720 (3959604) | 3959604..3960383 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| QUE45_RS20725 (3960373) | 3960373..3961251 | + | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| QUE45_RS20730 (3961269) | 3961269..3961703 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.004 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.001 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.004 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.004 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.004 |