NZ_AP023286604978..616652

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_AP023286        Location: 604978..616652         Organism: Escherichia coli strain 2018-18.25PC       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMH23_RS02870 () 599994..600428 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
JMH23_RS02875 () 600446..601324 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
JMH23_RS02880 () 601314..602078 - 765 WP_032292471.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
JMH23_RS02885 () 602089..602562 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
JMH23_RS02890 () 602585..603865 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
JMH23_RS02895 () 604114..604923 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
JMH23_RS02900 () 604978..605442 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
JMH23_RS02905 () 605442..605777 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
JMH23_RS02910 () 605926..607497 - 1572 WP_001273753.1 galactarate dehydratase -
JMH23_RS02915 () 607872..609206 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
JMH23_RS02920 () 609222..609992 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
JMH23_RS02925 () 610022..610912 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
JMH23_RS02930 () 611009..612154 + 1146 WP_001300387.1 glycerate 2-kinase -
JMH23_RS02940 () 613177..614364 - 1188 WP_032292470.1 YhaC family protein -
JMH23_RS02945 () 614386..614925 - 540 WP_000675733.1 hypothetical protein -
JMH23_RS02950 () 615181..615525 - 345 WP_000145840.1 transcriptional activator TdcR -
JMH23_RS02955 () 615714..616652 + 939 WP_000104211.1 transcriptional regulator TdcA -
JMH23_RS02960 () 616751..617740 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
JMH23_RS02965 () 617762..619093 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
JMH23_RS02970 () 619119..620327 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0