NZ_AP0232302796251..2807925

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_AP023230        Location: 2796251..2807925         Organism: Escherichia coli strain YJ4       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HXS62_RS13360 () 2791252..2791686 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
HXS62_RS13365 () 2791704..2792582 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
HXS62_RS13370 () 2792572..2793351 - 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
HXS62_RS13375 () 2793362..2793835 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
HXS62_RS13380 () 2793858..2795138 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
HXS62_RS13385 () 2795387..2796196 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
HXS62_RS13390 () 2796251..2796715 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
HXS62_RS13395 () 2796715..2797050 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
HXS62_RS13400 () 2797199..2798770 - 1572 WP_001273752.1 galactarate dehydratase -
HXS62_RS13405 () 2799145..2800479 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
HXS62_RS13410 () 2800495..2801265 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
HXS62_RS13415 () 2801295..2802185 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
HXS62_RS13420 () 2802282..2803427 + 1146 WP_001300387.1 glycerate 2-kinase -
HXS62_RS13430 () 2804450..2805637 - 1188 WP_000484598.1 YhaC family protein -
HXS62_RS13435 () 2805659..2806198 - 540 WP_000675733.1 hypothetical protein -
HXS62_RS13440 () 2806454..2806798 - 345 WP_000145840.1 transcriptional activator TdcR -
HXS62_RS13445 () 2806987..2807925 + 939 WP_000104195.1 transcriptional regulator TdcA -
HXS62_RS13450 () 2808024..2809013 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
HXS62_RS13455 () 2809035..2810366 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
HXS62_RS13460 () 2810392..2811600 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001