MGE detailed information
MGE type: Integron MGE length: 52082 bp
Accession: NZ_AP018677 Location: 1511738..1563819 Organism: Vibrio cholerae strain V060002 Replicon: chromosome
Accession: NZ_AP018677 Location: 1511738..1563819 Organism: Vibrio cholerae strain V060002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V060002_RS07235 () | 1507297..1510074 | - | 2778 | WP_000509636.1 | alkaline phosphatase family protein | - |
| V060002_RS07255 () | 1512225..1512638 | - | 414 | WP_000049420.1 | VOC family protein | - |
| V060002_RS07265 () | 1512822..1513337 | - | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| V060002_RS07270 () | 1513531..1513815 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| V060002_RS07275 () | 1513812..1514090 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| V060002_RS07280 () | 1514229..1514624 | - | 396 | WP_001000867.1 | hypothetical protein | - |
| V060002_RS07290 () | 1514875..1515000 | - | 126 | WP_001905700.1 | DUF645 family protein | - |
| V060002_RS07295 () | 1515299..1515820 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| V060002_RS07300 () | 1515814..1516083 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| V060002_RS07305 () | 1516114..1516218 | - | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| V060002_RS07310 () | 1516275..1516874 | - | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| V060002_RS07315 () | 1517024..1517896 | - | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| V060002_RS07320 () | 1518071..1518289 | - | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07325 () | 1518353..1518790 | - | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| V060002_RS07330 () | 1518909..1519118 | - | 210 | Protein_1355 | GNAT family N-acetyltransferase | - |
| V060002_RS07335 () | 1519254..1519643 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| V060002_RS07340 () | 1519800..1520717 | - | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| V060002_RS07345 () | 1520951..1521253 | - | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS07350 () | 1521241..1521498 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| V060002_RS07360 () | 1521700..1522233 | - | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| V060002_RS19480 () | 1522230..1522655 | - | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| V060002_RS07370 () | 1522722..1523093 | - | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| V060002_RS07375 () | 1523234..1523521 | - | 288 | WP_000426470.1 | hypothetical protein | - |
| V060002_RS07380 () | 1523673..1524341 | - | 669 | WP_000043871.1 | hypothetical protein | - |
| V060002_RS07385 () | 1524572..1524844 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| V060002_RS07390 () | 1524841..1525338 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| V060002_RS07400 () | 1525540..1525692 | - | 153 | WP_001884520.1 | DUF645 family protein | - |
| V060002_RS07405 () | 1526014..1526469 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07410 () | 1526597..1526884 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS07415 () | 1526874..1527125 | - | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| V060002_RS07420 () | 1527339..1527752 | - | 414 | WP_000049417.1 | VOC family protein | - |
| V060002_RS07425 () | 1527827..1527970 | - | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| V060002_RS07430 () | 1527940..1528341 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| V060002_RS07435 () | 1528341..1529033 | - | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| V060002_RS07440 () | 1529170..1529476 | - | 307 | Protein_1375 | Streptogramin A acetyltransferase | VF |
| V060002_RS07445 () | 1529544..1530524 | + | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| V060002_RS19485 () | 1530649..1530804 | - | 156 | WP_000751734.1 | hypothetical protein | - |
| V060002_RS07450 () | 1530972..1531406 | - | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07455 () | 1531543..1531857 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| V060002_RS07460 () | 1531844..1532176 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS07470 () | 1532517..1532744 | - | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| V060002_RS07475 () | 1532693..1532806 | - | 114 | WP_001889158.1 | hypothetical protein | - |
| V060002_RS07490 () | 1532972..1533253 | - | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| V060002_RS19490 () | 1533202..1533316 | - | 115 | Protein_1384 | acetyltransferase | - |
| V060002_RS07495 () | 1533373..1533750 | - | 378 | WP_000411109.1 | hypothetical protein | - |
| V060002_RS07500 () | 1533921..1534163 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| V060002_RS07505 () | 1534365..1534751 | - | 387 | WP_000703163.1 | VOC family protein | - |
| V060002_RS19565 () | 1534960..1535131 | - | 172 | Protein_1388 | DUF645 family protein | - |
| V060002_RS07515 () | 1535449..1535718 | - | 270 | WP_001198131.1 | hypothetical protein | - |
| V060002_RS07520 () | 1536078..1536251 | - | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| V060002_RS19505 () | 1536532..1536735 | - | 204 | WP_001911745.1 | hypothetical protein | - |
| V060002_RS07535 () | 1537022..1537573 | - | 552 | WP_000821930.1 | hypothetical protein | - |
| V060002_RS07540 () | 1537729..1538586 | - | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| V060002_RS07545 () | 1538733..1539347 | - | 615 | WP_000789575.1 | hypothetical protein | - |
| V060002_RS07555 () | 1539670..1539840 | - | 171 | WP_001882300.1 | DUF645 family protein | - |
| V060002_RS07565 () | 1540144..1540722 | - | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| V060002_RS07570 () | 1540973..1541958 | + | 986 | Protein_1397 | Sulfate-binding protein | VF |
| V060002_RS07575 () | 1542341..1542805 | + | 465 | WP_000140244.1 | hypothetical protein | - |
| V060002_RS07580 () | 1542905..1543303 | - | 399 | WP_001882293.1 | hypothetical protein | - |
| V060002_RS07590 () | 1543459..1543959 | - | 501 | WP_000789723.1 | hypothetical protein | - |
| V060002_RS07595 () | 1544097..1544627 | - | 531 | WP_000415563.1 | hypothetical protein | - |
| V060002_RS07600 () | 1544778..1545173 | - | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| V060002_RS07605 () | 1545381..1545806 | - | 426 | WP_000415748.1 | hypothetical protein | - |
| V060002_RS07610 () | 1546078..1546731 | - | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| V060002_RS07625 () | 1547302..1547550 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| V060002_RS07630 () | 1547540..1547830 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS07635 () | 1547966..1548481 | - | 516 | WP_001201528.1 | lipocalin family protein | - |
| V060002_RS07640 () | 1548618..1549094 | - | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07645 () | 1549122..1549232 | - | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| V060002_RS07650 () | 1549229..1550158 | - | 930 | WP_000335802.1 | hypothetical protein | - |
| V060002_RS07655 () | 1550278..1550724 | - | 447 | WP_000128977.1 | hypothetical protein | - |
| V060002_RS07660 () | 1550877..1551881 | - | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| V060002_RS07665 () | 1552094..1552132 | - | 39 | WP_106019119.1 | hypothetical protein | - |
| V060002_RS07670 () | 1552148..1552273 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| V060002_RS19510 () | 1552450..1552560 | - | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| V060002_RS07685 () | 1552557..1552874 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| V060002_RS07690 () | 1552885..1553172 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS07695 () | 1553439..1553619 | - | 181 | Protein_1418 | DUF645 family protein | - |
| V060002_RS07700 () | 1554044..1554277 | - | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| V060002_RS07705 () | 1554680..1554898 | - | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| V060002_RS07710 () | 1555208..1555861 | - | 654 | WP_000226874.1 | hypothetical protein | - |
| V060002_RS07715 () | 1555918..1556427 | - | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07720 () | 1556669..1556911 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| V060002_RS07725 () | 1556930..1557247 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| V060002_RS19515 () | 1557441..1557536 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| V060002_RS19390 () | 1557892..1558185 | - | 294 | WP_125460920.1 | hypothetical protein | - |
| V060002_RS07745 () | 1558332..1558679 | - | 348 | WP_000933409.1 | hypothetical protein | - |
| V060002_RS07750 () | 1558828..1559253 | - | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| V060002_RS07755 () | 1559449..1559628 | - | 180 | WP_001883039.1 | DUF645 family protein | - |
| V060002_RS07760 () | 1559925..1560461 | - | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| V060002_RS07765 () | 1560605..1561000 | - | 396 | WP_000046953.1 | hypothetical protein | - |
| V060002_RS07770 () | 1561177..1561358 | - | 182 | Protein_1432 | DUF645 family protein | - |
| V060002_RS07775 () | 1561661..1562056 | - | 396 | WP_000046952.1 | hypothetical protein | - |
| V060002_RS07780 () | 1562309..1562587 | - | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| V060002_RS07785 () | 1562705..1562815 | - | 111 | Protein_1435 | DUF3265 domain-containing protein | - |
| V060002_RS07790 () | 1562812..1563819 | - | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| V060002_RS07800 () | 1564237..1565414 | + | 1178 | WP_086010879.1 | IS3-like element ISVch4 family transposase | - |
| V060002_RS07805 () | 1565411..1566106 | + | 696 | WP_000213836.1 | hypothetical protein | - |
| V060002_RS07810 () | 1566167..1566673 | - | 507 | WP_001921103.1 | hypothetical protein | - |
| V060002_RS07815 () | 1566714..1567736 | - | 1023 | WP_000954291.1 | hypothetical protein | - |
| V060002_RS07820 () | 1567848..1567988 | - | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|