MGE detailed information
MGE type: Genomic_island MGE length: 10023 bp
Accession: NC_017491 Location: 509273..519295 Organism: Lactobacillus rhamnosus ATCC 8530 Replicon: chromosome
Accession: NC_017491 Location: 509273..519295 Organism: Lactobacillus rhamnosus ATCC 8530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRHK_RS02375 (LRHK_514) | 504837..505205 | - | 369 | WP_005686376.1 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| LRHK_RS02380 (LRHK_515) | 505354..505935 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit L | - |
| LRHK_RS02385 (LRHK_516) | 505922..506941 | - | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| LRHK_RS02390 (LRHK_517) | 507134..507562 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| LRHK_RS02395 (LRHK_518) | 508092..508781 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| LRHK_RS02400 (LRHK_520) | 509273..509881 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| LRHK_RS02410 (LRHK_522) | 510328..511203 | + | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| LRHK_RS02415 (LRHK_523) | 511446..512861 | - | 1416 | WP_005691634.1 | DNA polymerase III subunit epsilon | - |
| LRHK_RS13845 (LRHK_524) | 513085..513270 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LRHK_RS02420 (LRHK_525) | 513298..513570 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LRHK_RS02425 (LRHK_526) | 514132..514380 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| LRHK_RS02430 (LRHK_527) | 514623..514916 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LRHK_RS02435 (LRHK_528) | 514998..516161 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| LRHK_RS02440 (LRHK_529) | 516315..516890 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| LRHK_RS02445 (LRHK_530) | 517033..517629 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| LRHK_RS02450 (LRHK_531) | 517664..518845 | + | 1182 | WP_014571132.1 | transposase | - |
| LRHK_RS02460 (LRHK_532) | 519077..519295 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| LRHK_RS02465 (LRHK_533) | 519424..520294 | - | 871 | Protein_489 | class II fructose-1,6-bisphosphate aldolase | - |
| LRHK_RS02470 (LRHK_534) | 520883..522616 | + | 1734 | WP_005691647.1 | pyruvate oxidase | - |
| LRHK_RS02475 (LRHK_535) | 522828..523115 | - | 288 | WP_005691648.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0 | |
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0 | |
| Lactobacillus rhamnosus LOCK908 | Genomic island | TA29676 | NC_021725 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain SCT-10-10-60 | Genomic island | TA72233 | NZ_CP019305 | 517689..528892 | 0.003 | |
| Lacticaseibacillus rhamnosus strain JCM1553 | Genomic island | TA78456 | NZ_CP022109 | 517689..528892 | 0.003 | |
| Lacticaseibacillus rhamnosus strain BIO5326 | Genomic island | TA143788 | NZ_CP046267 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain KF7 | Genomic island | TA186159 | NZ_CP067365 | 528194..539428 | 0.003 | |
| Lacticaseibacillus rhamnosus strain X253 | Genomic island | TA200045 | NZ_CP073711 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain CAU 1365 | Genomic island | TA215714 | NZ_CP082961 | 2643831..2655034 | 0.003 | |
| Lacticaseibacillus rhamnosus strain PMC203 | Genomic island | TA222966 | NZ_CP086326 | 2427363..2438367 | 0.004 | |
| Lacticaseibacillus rhamnosus strain VHProbi Y39 | Genomic island | TA235496 | NZ_CP092033 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain P118 | Genomic island | TA248870 | NZ_CP099396 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain DM065 | Genomic island | TA254067 | NZ_CP102716 | 2430309..2441313 | 0.004 | |
| Lacticaseibacillus rhamnosus strain VSI33 | Genomic island | TA272698 | NZ_CP118035 | 517681..527703 | 0 | |
| Lacticaseibacillus rhamnosus strain VSI43 | Genomic island | TA272725 | NZ_CP118050 | 513060..524263 | 0.003 | |
| Lacticaseibacillus rhamnosus strain VSI43 | Genomic island | TA272725 | NZ_CP118050 | 513060..525273 | 0.005 | |
| Lacticaseibacillus rhamnosus strain A5 | Genomic island | TA275388 | NZ_CP120736 | 325746..336953 | 0.003 | |
| Lacticaseibacillus rhamnosus strain NCTC13710 | Genomic island | TA287676 | NZ_LR134322 | 517678..527700 | 0 | |
| Lacticaseibacillus rhamnosus strain NCTC13764 | Genomic island | TA287704 | NZ_LR134331 | 518870..528892 | 0 | |
| Lacticaseibacillus rhamnosus strain BPL5 | Genomic island | TA293114 | NZ_LT220504 | 1739484..1750488 | 0.004 |