NC_0046031901751..1949243

MGE detailed information

MGE type: Integron        MGE length: 47493 bp
Accession: NC_004603        Location: 1901751..1949243         Organism: Vibrio parahaemolyticus RIMD 2210633       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

VP_RS08560VP_RS08570VP_RS08575VP_RS08850VP_RS08855VP_RS08940VP_RS08945VP_RS09085VP_RS08565VP_RS08585VP_RS08590VP_RS08595VP_RS08600VP_RS08605VP_RS08610VP_RS08615VP_RS08620VP_RS08625VP_RS08630VP_RS08635VP_RS08640VP_RS08650VP_RS08655VP_RS23735VP_RS08665VP_RS08670VP_RS08675VP_RS08680VP_RS08685VP_RS08690VP_RS08695VP_RS08700VP_RS23700VP_RS08710VP_RS08715VP_RS08720VP_RS08725VP_RS08730VP_RS08735VP_RS08740VP_RS08745VP_RS08750VP_RS08755VP_RS08760VP_RS08765VP_RS08770VP_RS08775VP_RS08780VP_RS08785VP_RS08790VP_RS08795VP_RS08800VP_RS08805VP_RS08810VP_RS08815VP_RS08820VP_RS23585VP_RS08830VP_RS23705VP_RS08840VP_RS08845VP_RS08860VP_RS08865VP_RS08870VP_RS08875VP_RS08880VP_RS08885VP_RS08890VP_RS08895VP_RS08900VP_RS08905VP_RS08910VP_RS08915VP_RS08920VP_RS08925VP_RS08930VP_RS08935VP_RS08950VP_RS08955VP_RS08960VP_RS08965VP_RS08970VP_RS08975VP_RS08980VP_RS08985VP_RS08990VP_RS08995VP_RS09000VP_RS09005VP_RS09010VP_RS09015VP_RS09020VP_RS09025VP_RS09030VP_RS09035VP_RS09040VP_RS09045VP_RS09050VP_RS09055VP_RS09060VP_RS09065VP_RS09070VP_RS09075VP_RS09080VP_RS09090VP_RS09095VP_RS09100VP_RS09105VP_RS09110
Location: 1897541..1899016 (1476 bp)
Type: Others
Protein ID: WP_005477816.1
Location: 1899911..1900357 (447 bp)
Type: Others
Protein ID: Protein_1667
Location: 1900472..1900744 (273 bp)
Type: Others
Protein ID: WP_005464495.1
Location: 1928666..1928950 (285 bp)
Type: Antitoxin
Protein ID: WP_005483268.1
Location: 1928947..1929225 (279 bp)
Type: Toxin
Protein ID: WP_005483280.1
Location: 1935516..1935800 (285 bp)
Type: Antitoxin
Protein ID: WP_005483196.1
Location: 1935797..1936075 (279 bp)
Type: Toxin
Protein ID: WP_005483176.1
Location: 1948281..1949243 (963 bp)
Type: Transposase
Protein ID: WP_011105976.1
Location: 1899108..1899569 (462 bp)
Type: Others
Protein ID: WP_005464485.1
Location: 1902266..1902733 (468 bp)
Type: Others
Protein ID: WP_005464650.1
Location: 1902973..1903377 (405 bp)
Type: Others
Protein ID: WP_005477782.1
Location: 1903526..1904041 (516 bp)
Type: Others
Protein ID: WP_005477694.1
Location: 1904207..1904629 (423 bp)
Type: Others
Protein ID: WP_005477752.1
Location: 1904777..1905049 (273 bp)
Type: Others
Protein ID: WP_029853404.1
Location: 1905641..1906186 (546 bp)
Type: Others
Protein ID: WP_005477738.1
Location: 1906226..1906318 (93 bp)
Type: Others
Protein ID: WP_011105940.1
Location: 1906333..1907160 (828 bp)
Type: Others
Protein ID: WP_005477844.1
Location: 1907126..1907311 (186 bp)
Type: Others
Protein ID: WP_100069991.1
Location: 1907308..1907679 (372 bp)
Type: Others
Protein ID: WP_005462158.1
Location: 1907817..1908176 (360 bp)
Type: Others
Protein ID: WP_005477812.1
Location: 1908163..1908345 (183 bp)
Type: Others
Protein ID: WP_078532942.1
Location: 1909835..1910167 (333 bp)
Type: Others
Protein ID: WP_005477784.1
Location: 1910402..1910494 (93 bp)
Type: Others
Protein ID: WP_072866293.1
Location: 1910524..1912074 (1551 bp)
Type: Others
Protein ID: WP_005462176.1
Location: 1912111..1912242 (132 bp)
Type: Others
Protein ID: WP_017420680.1
Location: 1912730..1912822 (93 bp)
Type: Others
Protein ID: WP_011105944.1
Location: 1912850..1913230 (381 bp)
Type: Others
Protein ID: WP_005477828.1
Location: 1913371..1914153 (783 bp)
Type: Others
Protein ID: WP_005462179.1
Location: 1914201..1914293 (93 bp)
Type: Others
Protein ID: WP_072866292.1
Location: 1914308..1914619 (312 bp)
Type: Others
Protein ID: WP_005477810.1
Location: 1914764..1915102 (339 bp)
Type: Others
Protein ID: WP_005477736.1
Location: 1915251..1915658 (408 bp)
Type: Others
Protein ID: WP_005466276.1
Location: 1915708..1915800 (93 bp)
Type: Others
Protein ID: WP_005433818.1
Location: 1915820..1916500 (681 bp)
Type: Others
Protein ID: WP_005477709.1
Location: 1917023..1917160 (138 bp)
Type: Others
Protein ID: WP_029795349.1
Location: 1917688..1918755 (1068 bp)
Type: Others
Protein ID: WP_005477775.1
Location: 1918881..1919270 (390 bp)
Type: Others
Protein ID: WP_005490691.1
Location: 1919308..1919400 (93 bp)
Type: Others
Protein ID: WP_072833112.1
Location: 1919390..1919866 (477 bp)
Type: Others
Protein ID: WP_017449567.1
Location: 1919988..1920119 (132 bp)
Type: Others
Protein ID: WP_078532947.1
Location: 1920199..1920405 (207 bp)
Type: Others
Protein ID: WP_005462168.1
Location: 1920608..1920700 (93 bp)
Type: Others
Protein ID: WP_017045846.1
Location: 1920735..1921136 (402 bp)
Type: Others
Protein ID: WP_005483261.1
Location: 1921169..1921285 (117 bp)
Type: Others
Protein ID: WP_161609362.1
Location: 1921289..1921735 (447 bp)
Type: Others
Protein ID: WP_024699215.1
Location: 1922313..1922402 (90 bp)
Type: Others
Protein ID: WP_072833196.1
Location: 1922430..1922810 (381 bp)
Type: Others
Protein ID: WP_005467118.1
Location: 1922975..1923244 (270 bp)
Type: Toxin
Protein ID: WP_005464459.1
Location: 1923237..1923491 (255 bp)
Type: Antitoxin
Protein ID: WP_005483180.1
Location: 1923594..1923686 (93 bp)
Type: Others
Protein ID: WP_011105955.1
Location: 1923710..1924879 (1170 bp)
Type: Others
Protein ID: WP_005483289.1
Location: 1924843..1924935 (93 bp)
Type: Others
Protein ID: WP_072833197.1
Location: 1924950..1925483 (534 bp)
Type: Others
Protein ID: WP_005483198.1
Location: 1925581..1925673 (93 bp)
Type: Others
Protein ID: WP_005464677.1
Location: 1925696..1926466 (771 bp)
Type: Others
Protein ID: WP_005464405.1
Location: 1926537..1927358 (822 bp)
Type: Others
Protein ID: WP_005464673.1
Location: 1927333..1927473 (141 bp)
Type: Others
Protein ID: WP_162828790.1
Location: 1927502..1928044 (543 bp)
Type: Others
Protein ID: WP_005464345.1
Location: 1928077..1928166 (90 bp)
Type: Others
Protein ID: WP_072833190.1
Location: 1928198..1928470 (273 bp)
Type: Others
Protein ID: WP_005462157.1
Location: 1928497..1928664 (168 bp)
Type: Others
Protein ID: WP_078532952.1
Location: 1929254..1929364 (111 bp)
Type: Others
Protein ID: WP_082798391.1
Location: 1929372..1929656 (285 bp)
Type: Others
Protein ID: WP_005483310.1
Location: 1929701..1929823 (123 bp)
Type: Others
Protein ID: WP_078511351.1
Location: 1929820..1930296 (477 bp)
Type: Others
Protein ID: WP_005483302.1
Location: 1930324..1930425 (102 bp)
Type: Others
Protein ID: WP_011105959.1
Location: 1930441..1930726 (286 bp)
Type: Others
Protein ID: Protein_1729
Location: 1930888..1931355 (468 bp)
Type: Others
Protein ID: WP_005464650.1
Location: 1931456..1931533 (78 bp)
Type: Others
Protein ID: WP_072833152.1
Location: 1931562..1931936 (375 bp)
Type: Others
Protein ID: WP_005483170.1
Location: 1932074..1932583 (510 bp)
Type: VF
Protein ID: WP_005483274.1
Location: 1933192..1933284 (93 bp)
Type: Others
Protein ID: WP_011105963.1
Location: 1933312..1933824 (513 bp)
Type: Others
Protein ID: WP_024699234.1
Location: 1933966..1934547 (582 bp)
Type: Others
Protein ID: WP_005483293.1
Location: 1934575..1934697 (123 bp)
Type: Others
Protein ID: WP_021451208.1
Location: 1934681..1935319 (639 bp)
Type: Others
Protein ID: WP_005483241.1
Location: 1935348..1935439 (92 bp)
Type: Others
Protein ID: Protein_1739
Location: 1936104..1936220 (117 bp)
Type: Others
Protein ID: WP_080931826.1
Location: 1936227..1936748 (522 bp)
Type: Others
Protein ID: WP_005483288.1
Location: 1936887..1937561 (675 bp)
Type: Others
Protein ID: WP_005483207.1
Location: 1937695..1938093 (399 bp)
Type: Others
Protein ID: WP_005483218.1
Location: 1938305..1938979 (675 bp)
Type: Others
Protein ID: WP_005483286.1
Location: 1939126..1939398 (273 bp)
Type: Others
Protein ID: WP_029853404.1
Location: 1939537..1939776 (240 bp)
Type: Others
Protein ID: WP_005483258.1
Location: 1939913..1940002 (90 bp)
Type: Others
Protein ID: WP_072833189.1
Location: 1940031..1940447 (417 bp)
Type: Others
Protein ID: WP_021451209.1
Location: 1940492..1940584 (93 bp)
Type: Others
Protein ID: WP_072833185.1
Location: 1940599..1941237 (639 bp)
Type: Others
Protein ID: WP_005483174.1
Location: 1941364..1941456 (93 bp)
Type: Others
Protein ID: WP_072833197.1
Location: 1941471..1942004 (534 bp)
Type: Others
Protein ID: WP_005483198.1
Location: 1942102..1942194 (93 bp)
Type: Others
Protein ID: WP_017045846.1
Location: 1942229..1942630 (402 bp)
Type: Others
Protein ID: WP_005483261.1
Location: 1942771..1943598 (828 bp)
Type: Others
Protein ID: WP_005483178.1
Location: 1943745..1944152 (408 bp)
Type: Others
Protein ID: WP_005490677.1
Location: 1944186..1944296 (111 bp)
Type: Others
Protein ID: WP_154581842.1
Location: 1944293..1944835 (543 bp)
Type: Others
Protein ID: WP_005483282.1
Location: 1944811..1944933 (123 bp)
Type: Others
Protein ID: WP_011105972.1
Location: 1945048..1945227 (180 bp)
Type: Others
Protein ID: WP_005483243.1
Location: 1945526..1946035 (510 bp)
Type: VF
Protein ID: WP_005483274.1
Location: 1946064..1946180 (117 bp)
Type: Others
Protein ID: WP_005483184.1
Location: 1946182..1946640 (459 bp)
Type: Others
Protein ID: WP_005483220.1
Location: 1946643..1946762 (120 bp)
Type: Others
Protein ID: Protein_1766
Location: 1946780..1947415 (636 bp)
Type: Others
Protein ID: WP_005483168.1
Location: 1947586..1947999 (414 bp)
Type: Others
Protein ID: WP_005483188.1
Location: 1949294..1949767 (474 bp)
Type: Others
Protein ID: WP_005458833.1
Location: 1949781..1950368 (588 bp)
Type: Others
Protein ID: WP_005458832.1
Location: 1950370..1950954 (585 bp)
Type: Others
Protein ID: WP_005458831.1
Location: 1950990..1952534 (1545 bp)
Type: Others
Protein ID: WP_005483314.1
Location: 1952635..1953675 (1041 bp)
Type: Others
Protein ID: WP_005483263.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
VP_RS08560 (VP1782)1897541..1899016+1476WP_005477816.1sodium:proton antiporter-
VP_RS08565 (VP1783)1899108..1899569-462WP_005464485.1hypothetical protein-
VP_RS085701899911..1900357+447Protein_1667DUF3291 domain-containing protein-
VP_RS08575 (VP1786)1900472..1900744+273WP_005464495.1hypothetical protein-
VP_RS08585 (VP1789)1902266..1902733-468WP_005464650.1cold shock domain-containing protein-
VP_RS08590 (VP1790)1902973..1903377-405WP_005477782.1GFA family protein-
VP_RS08595 (VP1791)1903526..1904041-516WP_005477694.1hypothetical protein-
VP_RS08600 (VP1792)1904207..1904629-423WP_005477752.1hypothetical protein-
VP_RS086051904777..1905049-273WP_029853404.1hypothetical protein-
VP_RS08610 (VP1794)1905641..1906186-546WP_005477738.1GNAT family N-acetyltransferase-
VP_RS08615 (VP1795)1906226..1906318-93WP_011105940.1DUF3265 domain-containing protein-
VP_RS08620 (VP1796)1906333..1907160-828WP_005477844.1hypothetical protein-
VP_RS086251907126..1907311-186WP_100069991.1DUF3265 domain-containing protein-
VP_RS08630 (VP1797)1907308..1907679-372WP_005462158.1RidA family protein-
VP_RS08635 (VP1798)1907817..1908176-360WP_005477812.1VOC family protein-
VP_RS086401908163..1908345-183WP_078532942.1DUF3265 domain-containing protein-
VP_RS08650 (VP1801)1909835..1910167-333WP_005477784.1hypothetical protein-
VP_RS086551910402..1910494-93WP_072866293.1DUF3265 domain-containing protein-
VP_RS237351910524..1912074-1551WP_005462176.1hypothetical protein-
VP_RS086651912111..1912242-132WP_017420680.1DUF3265 domain-containing protein-
Showing 1 to 20 of 109 rows
102550100
 rows per page

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
Vibrio parahaemolyticus strain FDAARGOS_191IntegronTA74678, TA74679, TA74680NZ_CP0204273215326..32628180
Vibrio parahaemolyticus strain VPD14IntegronTA110058, TA110059, TA110060NZ_CP0317811322242..13691490
Vibrio parahaemolyticus strain RMDVP1IntegronTA253628, TA253629, TA253630NZ_CP1024341327052..13739590