Pseudomonas savastanoi
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
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REG0038 | PSA3335_06200 (dgcP) | T6SS01041 | protein | c-di-GMP regulatory pathway | Pseudomonas savastanoi pv. savastanoi NCPPB 3335 | chromosome (NZ_CP008742) | 1344347..1346692 (+) | 488618048 | the levels of c-di-GMP (↓) |
REG0334 | PSA3335_RS05390 (iaaM) | T6SS01041 | protein | IAA regulatory pathway | Pseudomonas savastanoi pv. savastanoi NCPPB 3335 | chromosome (NZ_CP008742) | 1090961..1092634 (-) | 488619197 | The transcript levels of vgrG (↓) |
REG0335 | PSA3335_RS05385 (iaaH) | T6SS01041 | protein | IAA regulatory pathway | Pseudomonas savastanoi pv. savastanoi NCPPB 3335 | chromosome (NZ_CP008742) | 1089578..1090918 (-) | 488619198 | The transcript levels of vgrG (↓) |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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