Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL076_RS05340 Genome accession   NZ_LR134275
Coordinates   1045915..1046397 (-) Length   160 a.a.
NCBI ID   WP_003093051.1    Uniprot ID   -
Organism   Streptococcus vestibularis strain NCTC12167     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1040915..1051397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS05315 (NCTC12167_01056) pepT 1041398..1042621 (-) 1224 WP_126429545.1 peptidase T -
  EL076_RS05325 (NCTC12167_01057) lepB 1042828..1043385 (-) 558 WP_003092871.1 signal peptidase I -
  EL076_RS05330 (NCTC12167_01058) - 1043508..1044737 (-) 1230 WP_003092446.1 tetratricopeptide repeat protein -
  EL076_RS05335 (NCTC12167_01059) - 1044727..1045905 (-) 1179 WP_064519699.1 AI-2E family transporter -
  EL076_RS05340 (NCTC12167_01060) mutX 1045915..1046397 (-) 483 WP_003093051.1 8-oxo-dGTP diphosphatase Machinery gene
  EL076_RS05345 (NCTC12167_01062) ftsX 1046553..1047482 (-) 930 WP_003092823.1 permease-like cell division protein FtsX -
  EL076_RS05350 (NCTC12167_01063) ftsE 1047475..1048167 (-) 693 WP_003092794.1 cell division ATP-binding protein FtsE -
  EL076_RS05360 (NCTC12167_01065) queG 1049405..1050523 (-) 1119 WP_064519705.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18856.17 Da        Isoelectric Point: 4.4221

>NTDB_id=999697 EL076_RS05340 WP_003093051.1 1045915..1046397(-) (mutX) [Streptococcus vestibularis strain NCTC12167]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHFTVTEMNFKGMITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLTKPTWEGDYEIFKWILEDRPFFSAKFVYDSNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=999697 EL076_RS05340 WP_003093051.1 1045915..1046397(-) (mutX) [Streptococcus vestibularis strain NCTC12167]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCTGGAGAGACACCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACCCATTTTACAGTAACTGAGATGAACTTCAAAGGTATGATTACCTTCCCTGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAGAACTCATTTCTGATGAGGAATCTCGCGAAGGGACACT
TGAATGGGTGCCATATGATCAGGTTTTAACGAAGCCAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTTGAAG
ATAGACCTTTCTTCTCTGCAAAATTTGTTTATGATTCTAACCAGAACTTGGTAGATAAAACTGTAACTTTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.44

99.375

0.7

Multiple sequence alignment