Detailed information NTG0999630

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EL086_RS09590
• Genome accession: NZ_LR134274
• Coordinates: 2056292..2056684 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NCTC8618
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2051292..2061684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL086_RS09550 (NCTC8618_04352)	dapD	2051371..2052069 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
EL086_RS09555 (NCTC8618_04353)	-	2052155..2052907 (-)	753	WP_038676849.1	HAD family hydrolase	-
EL086_RS09560 (NCTC8618_04354)	-	2053021..2053860 (-)	840	WP_038676851.1	methyltransferase domain-containing protein	-
EL086_RS09570 (NCTC8618_04356)	-	2054282..2054440 (+)	159	WP_038676853.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EL086_RS09575 (NCTC8618_04357)	-	2054460..2054627 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
EL086_RS09580 (NCTC8618_04358)	-	2054675..2054929 (+)	255	WP_038676855.1	hypothetical protein	-
EL086_RS09585 (NCTC8618_04359)	tadA	2055014..2055532 (-)	519	WP_049553956.1	tRNA adenosine(34) deaminase TadA	-
EL086_RS09590 (NCTC8618_04360)	ssbA	2056292..2056684 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
EL086_RS09595 (NCTC8618_04361)	-	2057113..2057790 (-)	678	WP_002887005.1	CPBP family intramembrane glutamic endopeptidase	-
EL086_RS09600 (NCTC8618_04362)	ytpR	2058057..2058680 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
EL086_RS09605 (NCTC8618_04363)	-	2058712..2059236 (-)	525	WP_002885713.1	hypothetical protein	-
EL086_RS09610 (NCTC8618_04364)	-	2059240..2059554 (-)	315	WP_002887006.1	thioredoxin family protein	-
EL086_RS09615 (NCTC8618_04365)	-	2059551..2059835 (-)	285	WP_038677057.1	DUF4651 domain-containing protein	-
EL086_RS09620 (NCTC8618_04366)	pepA	2059935..2061002 (+)	1068	WP_002887007.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=999630 EL086_RS09590 WP_002885697.1 2056292..2056684(-) (ssbA) [Streptococcus salivarius strain NCTC8618]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=999630 EL086_RS09590 WP_002885697.1 2056292..2056684(-) (ssbA) [Streptococcus salivarius strain NCTC8618]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACTCGT
AAGTACGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385