Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ABC799_RS01870 | Genome accession | NZ_CP155534 |
| Coordinates | 348258..348653 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282443.1 | Uniprot ID | A0A0E8PDH7 |
| Organism | Streptococcus pneumoniae strain DCC1476 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 343258..353653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC799_RS01820 (ABC799_01820) | - | 343383..343745 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| ABC799_RS01825 (ABC799_01825) | - | 343742..344245 (+) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| ABC799_RS01830 (ABC799_01830) | - | 344359..344805 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ABC799_RS01835 (ABC799_01835) | - | 344811..345485 (+) | 675 | WP_000725750.1 | membrane protein | - |
| ABC799_RS01840 (ABC799_01840) | - | 345646..345837 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ABC799_RS01845 (ABC799_01845) | - | 345862..345924 (+) | 63 | WP_219335288.1 | hypothetical protein | - |
| ABC799_RS01850 (ABC799_01850) | - | 346122..346421 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ABC799_RS01855 (ABC799_01855) | - | 346418..346735 (+) | 318 | WP_000615769.1 | thioredoxin family protein | - |
| ABC799_RS01860 (ABC799_01860) | ytpR | 346751..347377 (+) | 627 | WP_000578289.1 | YtpR family tRNA-binding protein | - |
| ABC799_RS01865 (ABC799_01865) | - | 347419..348180 (+) | 762 | WP_001107758.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ABC799_RS01870 (ABC799_01870) | ssbB/cilA | 348258..348653 (+) | 396 | WP_000282443.1 | single-stranded DNA-binding protein | Machinery gene |
| ABC799_RS01875 (ABC799_01875) | groES | 348809..349093 (+) | 285 | WP_000917299.1 | co-chaperone GroES | - |
| ABC799_RS01880 (ABC799_01880) | groL | 349109..350731 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ABC799_RS01885 (ABC799_01885) | - | 350830..352136 (-) | 1307 | Protein_342 | transposase | - |
| ABC799_RS01890 (ABC799_01890) | - | 352297..352503 (+) | 207 | WP_000775827.1 | transcriptional regulator | - |
| ABC799_RS01895 (ABC799_01895) | - | 352858..353391 (-) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14935.91 Da Isoelectric Point: 5.9409
>NTDB_id=997251 ABC799_RS01870 WP_000282443.1 348258..348653(+) (ssbB/cilA) [Streptococcus pneumoniae strain DCC1476]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=997251 ABC799_RS01870 WP_000282443.1 348258..348653(+) (ssbB/cilA) [Streptococcus pneumoniae strain DCC1476]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
96.947 |
100 |
0.969 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |