Detailed information NTG0994483

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAYT23_RS09275
• Genome accession: NZ_CP154877
• Coordinates: 1793695..1794099 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 20234295
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1788695..1799099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYT23_RS09235 (AAYT23_09220)	rnpA	1789109..1789480 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AAYT23_RS09240 (AAYT23_09225)	-	1789497..1789628 (-)	132	WP_000768904.1	hypothetical protein	-
AAYT23_RS09245 (AAYT23_09230)	-	1789629..1790819 (-)	1191	WP_000167753.1	acetate kinase	-
AAYT23_RS09250 (AAYT23_09235)	comYH	1790870..1791823 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
AAYT23_RS09255 (AAYT23_09240)	-	1791884..1792478 (-)	595	Protein_1795	class I SAM-dependent methyltransferase	-
AAYT23_RS09260 (AAYT23_09245)	comGG/cglG	1792615..1793028 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAYT23_RS09265 (AAYT23_09250)	comGF/cglF	1793006..1793467 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAYT23_RS09270 (AAYT23_09255)	comGE/cglE	1793430..1793732 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAYT23_RS09275 (AAYT23_09260)	comGD/cglD	1793695..1794099 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAYT23_RS09280 (AAYT23_09265)	comGC/cglC	1794092..1794418 (-)	327	WP_000738631.1	comG operon protein ComGC	Machinery gene
AAYT23_RS09285 (AAYT23_09270)	comGB/cglB	1794420..1795436 (-)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAYT23_RS09290 (AAYT23_09275)	comGA/cglA/cilD	1795384..1796325 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
AAYT23_RS09295 (AAYT23_09280)	-	1796401..1796766 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAYT23_RS09300 (AAYT23_09285)	-	1796917..1797975 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=994483 AAYT23_RS09275 WP_000588023.1 1793695..1794099(-) (comGD/cglD) [Streptococcus pneumoniae strain 20234295]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=994483 AAYT23_RS09275 WP_000588023.1 1793695..1794099(-) (comGD/cglD) [Streptococcus pneumoniae strain 20234295]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47