Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | R8570_RS09135 | Genome accession | NZ_AP026932 |
| Coordinates | 1804567..1804962 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain PZ900701549 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1799567..1809962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8570_RS09110 (PC1528_18080) | - | 1799788..1800321 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| R8570_RS10935 (PC1528_18090) | - | 1800680..1800886 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| R8570_RS09120 (PC1528_18100) | - | 1801046..1802275 (+) | 1230 | WP_000436324.1 | ISL3 family transposase | - |
| R8570_RS09125 (PC1528_18110) | groL | 1802375..1803997 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| R8570_RS09130 (PC1528_18120) | groES | 1804013..1804297 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| R8570_RS09135 (PC1528_18130) | ssbB/cilA | 1804567..1804962 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| R8570_RS09140 (PC1528_18140) | - | 1805039..1805800 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| R8570_RS09145 (PC1528_18150) | ytpR | 1805833..1806462 (-) | 630 | WP_000578314.1 | YtpR family tRNA-binding protein | - |
| R8570_RS09150 (PC1528_18160) | - | 1806478..1806795 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| R8570_RS09155 (PC1528_18170) | - | 1806792..1807091 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| R8570_RS09160 | - | 1807329..1807391 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| R8570_RS09165 (PC1528_18180) | - | 1807416..1807607 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| R8570_RS09170 (PC1528_18190) | - | 1807768..1808442 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| R8570_RS09175 (PC1528_18200) | - | 1808448..1808894 (-) | 447 | WP_050263722.1 | LytTR family DNA-binding domain-containing protein | - |
| R8570_RS09180 | - | 1809008..1809511 (-) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| R8570_RS09185 (PC1528_18210) | - | 1809508..1809870 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=98914 R8570_RS09135 WP_000282467.1 1804567..1804962(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701549]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=98914 R8570_RS09135 WP_000282467.1 1804567..1804962(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701549]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |