Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | AAHH81_RS08650 | Genome accession | NZ_CP152418 |
| Coordinates | 1704178..1704573 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain 20234287 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1699178..1709573
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHH81_RS08625 (AAHH81_08610) | - | 1699402..1699935 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| AAHH81_RS08630 (AAHH81_08615) | - | 1700290..1700496 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| AAHH81_RS08635 (AAHH81_08620) | - | 1700657..1701886 (+) | 1230 | WP_369916958.1 | ISL3 family transposase | - |
| AAHH81_RS08640 (AAHH81_08625) | groL | 1701986..1703608 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| AAHH81_RS08645 (AAHH81_08630) | groES | 1703624..1703908 (-) | 285 | WP_000917304.1 | co-chaperone GroES | - |
| AAHH81_RS08650 (AAHH81_08635) | ssbB/cilA | 1704178..1704573 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| AAHH81_RS08655 (AAHH81_08640) | - | 1704651..1705412 (-) | 762 | WP_057609297.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| AAHH81_RS08660 (AAHH81_08645) | ytpR | 1705445..1706071 (-) | 627 | WP_369916959.1 | YtpR family tRNA-binding protein | - |
| AAHH81_RS08665 (AAHH81_08650) | - | 1706087..1706404 (-) | 318 | WP_374918023.1 | thioredoxin family protein | - |
| AAHH81_RS08670 (AAHH81_08655) | - | 1706401..1706700 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| AAHH81_RS08675 (AAHH81_08660) | - | 1706898..1706960 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| AAHH81_RS08680 (AAHH81_08665) | - | 1706985..1707176 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| AAHH81_RS08685 (AAHH81_08670) | - | 1707337..1708011 (-) | 675 | WP_000725751.1 | LiaF transmembrane domain-containing protein | - |
| AAHH81_RS08690 (AAHH81_08675) | - | 1708017..1708463 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| AAHH81_RS08695 (AAHH81_08680) | - | 1708577..1709080 (-) | 504 | WP_000800944.1 | phosphatase PAP2 family protein | - |
| AAHH81_RS08700 (AAHH81_08685) | - | 1709077..1709439 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=989088 AAHH81_RS08650 WP_000282467.1 1704178..1704573(-) (ssbB/cilA) [Streptococcus pneumoniae strain 20234287]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=989088 AAHH81_RS08650 WP_000282467.1 1704178..1704573(-) (ssbB/cilA) [Streptococcus pneumoniae strain 20234287]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |