Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | R8635_RS09695 | Genome accession | NZ_AP026924 |
| Coordinates | 1876485..1876880 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain PZ900700063 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1871485..1881880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8635_RS09670 (PC0062_19050) | - | 1871681..1872214 (+) | 534 | WP_268217921.1 | DUF402 domain-containing protein | - |
| R8635_RS09675 (PC0062_19060) | - | 1872572..1872778 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| R8635_RS09680 (PC0062_19070) | - | 1872938..1874194 (+) | 1257 | WP_268217922.1 | ISL3 family transposase | - |
| R8635_RS09685 (PC0062_19080) | groL | 1874293..1875915 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| R8635_RS09690 (PC0062_19090) | groES | 1875931..1876215 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| R8635_RS09695 (PC0062_19100) | ssbB/cilA | 1876485..1876880 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| R8635_RS09700 (PC0062_19110) | - | 1876958..1877719 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| R8635_RS09705 (PC0062_19120) | ytpR | 1877752..1878378 (-) | 627 | WP_000578302.1 | YtpR family tRNA-binding protein | - |
| R8635_RS09710 (PC0062_19130) | - | 1878394..1878711 (-) | 318 | WP_000615774.1 | thioredoxin family protein | - |
| R8635_RS09715 (PC0062_19140) | - | 1878708..1879007 (-) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| R8635_RS09720 | - | 1879101..1879232 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| R8635_RS11640 | - | 1879344..1879539 (-) | 196 | Protein_1910 | cell wall-binding protein | - |
| R8635_RS09730 (PC0062_19150) | - | 1879700..1880374 (-) | 675 | WP_000725721.1 | LiaF transmembrane domain-containing protein | - |
| R8635_RS09735 (PC0062_19160) | - | 1880379..1880825 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| R8635_RS09740 | - | 1880939..1881442 (-) | 504 | WP_000800939.1 | phosphatase PAP2 family protein | - |
| R8635_RS09745 (PC0062_19170) | - | 1881439..1881801 (-) | 363 | WP_000078801.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=98287 R8635_RS09695 WP_000282467.1 1876485..1876880(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900700063]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=98287 R8635_RS09695 WP_000282467.1 1876485..1876880(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900700063]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |