Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AAFX31_RS20075 | Genome accession | NZ_CP151941 |
| Coordinates | 2583301..2583600 (+) | Length | 99 a.a. |
| NCBI ID | WP_061033659.1 | Uniprot ID | A0A7V7NV94 |
| Organism | Vibrio chagasii strain TBV018 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2578301..2588600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFX31_RS20065 (AAFX31_20080) | - | 2580743..2581036 (+) | 294 | WP_012604504.1 | HU family DNA-binding protein | - |
| AAFX31_RS20070 (AAFX31_20085) | ppiD | 2581257..2583122 (+) | 1866 | WP_061033660.1 | peptidylprolyl isomerase | - |
| AAFX31_RS20075 (AAFX31_20090) | comEA | 2583301..2583600 (+) | 300 | WP_061033659.1 | ComEA family DNA-binding protein | Machinery gene |
| AAFX31_RS20080 (AAFX31_20095) | rrtA | 2583597..2584139 (-) | 543 | WP_061033658.1 | rhombosortase | - |
| AAFX31_RS20085 (AAFX31_20100) | - | 2584149..2584748 (+) | 600 | WP_061033657.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AAFX31_RS20090 (AAFX31_20105) | - | 2584799..2586142 (-) | 1344 | WP_171762660.1 | anti-phage deoxyguanosine triphosphatase | - |
| AAFX31_RS20095 (AAFX31_20110) | yfbR | 2586194..2586778 (-) | 585 | WP_061033655.1 | 5'-deoxynucleotidase | - |
| AAFX31_RS20100 (AAFX31_20115) | - | 2586949..2588181 (-) | 1233 | WP_004739935.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10676.19 Da Isoelectric Point: 4.3322
>NTDB_id=981427 AAFX31_RS20075 WP_061033659.1 2583301..2583600(+) (comEA) [Vibrio chagasii strain TBV018]
MRTLYSTLLLSLLMFLSPTALADSPTKAELYDGIEVTVNINTATAEELSALLVGVGDKKAKDIVDYRTENGAFATADDLV
SVKGIGEATVEKNRERIQL
MRTLYSTLLLSLLMFLSPTALADSPTKAELYDGIEVTVNINTATAEELSALLVGVGDKKAKDIVDYRTENGAFATADDLV
SVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=981427 AAFX31_RS20075 WP_061033659.1 2583301..2583600(+) (comEA) [Vibrio chagasii strain TBV018]
ATGCGCACTCTATATTCAACACTACTTCTTTCACTTCTGATGTTTTTAAGCCCTACAGCACTCGCAGACAGCCCAACTAA
GGCTGAGCTTTATGATGGCATTGAGGTTACAGTAAACATTAATACCGCGACCGCAGAAGAGCTATCAGCGCTATTGGTTG
GTGTGGGCGATAAGAAAGCCAAAGACATTGTCGACTATAGAACTGAGAACGGTGCATTTGCTACCGCTGACGATTTGGTG
AGTGTCAAAGGGATTGGTGAAGCAACGGTTGAGAAGAATCGCGAAAGAATACAGCTTTAG
ATGCGCACTCTATATTCAACACTACTTCTTTCACTTCTGATGTTTTTAAGCCCTACAGCACTCGCAGACAGCCCAACTAA
GGCTGAGCTTTATGATGGCATTGAGGTTACAGTAAACATTAATACCGCGACCGCAGAAGAGCTATCAGCGCTATTGGTTG
GTGTGGGCGATAAGAAAGCCAAAGACATTGTCGACTATAGAACTGAGAACGGTGCATTTGCTACCGCTGACGATTTGGTG
AGTGTCAAAGGGATTGGTGAAGCAACGGTTGAGAAGAATCGCGAAAGAATACAGCTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60.87 |
92.929 |
0.566 |
| comEA | Vibrio campbellii strain DS40M4 |
57.609 |
92.929 |
0.535 |
| comEA | Vibrio cholerae C6706 |
51.485 |
100 |
0.525 |
| comEA | Vibrio cholerae strain A1552 |
51.485 |
100 |
0.525 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.909 |
100 |
0.455 |
| comEA | Acinetobacter baylyi ADP1 |
51.22 |
82.828 |
0.424 |
| comEA | Acinetobacter baumannii strain A118 |
30.769 |
100 |
0.404 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
38 |
100 |
0.384 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
38 |
100 |
0.384 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
38 |
100 |
0.384 |