Detailed information
Bioinformatically predicted
Overview
| Name | comYC | Type | Machinery gene |
| Locus tag | AAEO79_RS03670 | Genome accession | NZ_CP151540 |
| Coordinates | 743608..743892 (+) | Length | 94 a.a. |
| NCBI ID | WP_379946609.1 | Uniprot ID | - |
| Organism | Enterococcus devriesei strain Ed-CK-24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 738608..748892
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAEO79_RS03645 (AAEO79_03635) | dat | 738960..739829 (+) | 870 | WP_379946605.1 | D-amino-acid transaminase | - |
| AAEO79_RS03650 (AAEO79_03640) | - | 739919..740701 (+) | 783 | WP_071862171.1 | phosphotransferase family protein | - |
| AAEO79_RS03655 (AAEO79_03645) | trmB | 740792..741442 (+) | 651 | WP_379946606.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| AAEO79_RS03660 (AAEO79_03650) | comGA | 741682..742638 (+) | 957 | WP_379946607.1 | competence type IV pilus ATPase ComGA | - |
| AAEO79_RS03665 (AAEO79_03655) | comGB | 742598..743611 (+) | 1014 | WP_379946608.1 | competence type IV pilus assembly protein ComGB | - |
| AAEO79_RS03670 (AAEO79_03660) | comYC | 743608..743892 (+) | 285 | WP_379946609.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AAEO79_RS03675 (AAEO79_03665) | comGD | 743870..744337 (+) | 468 | WP_379946610.1 | competence type IV pilus minor pilin ComGD | - |
| AAEO79_RS03680 (AAEO79_03670) | comGE | 744315..744596 (+) | 282 | WP_311900492.1 | competence type IV pilus minor pilin ComGE | - |
| AAEO79_RS03685 (AAEO79_03675) | comGF | 744583..745005 (+) | 423 | WP_313630444.1 | competence type IV pilus minor pilin ComGF | - |
| AAEO79_RS03690 (AAEO79_03680) | comGG | 744983..745318 (+) | 336 | WP_249024085.1 | competence type IV pilus minor pilin ComGG | - |
| AAEO79_RS03695 (AAEO79_03685) | - | 745484..746491 (+) | 1008 | WP_379946611.1 | class I SAM-dependent methyltransferase | - |
| AAEO79_RS03700 (AAEO79_03690) | - | 746541..747737 (+) | 1197 | WP_313630446.1 | acetate kinase | - |
| AAEO79_RS03705 (AAEO79_03695) | - | 747916..748392 (-) | 477 | WP_071863167.1 | MGMT family protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10757.83 Da Isoelectric Point: 9.3736
>NTDB_id=979019 AAEO79_RS03670 WP_379946609.1 743608..743892(+) (comYC) [Enterococcus devriesei strain Ed-CK-24]
MKKIVSKKLPGFTLLEMLVVLFIISLLLLLFVPKLINQKDAAQKKSDAAIVKVVETQIQVFELDHGHTPTKEELIGKDYV
DEKQYTVYEKAKKE
MKKIVSKKLPGFTLLEMLVVLFIISLLLLLFVPKLINQKDAAQKKSDAAIVKVVETQIQVFELDHGHTPTKEELIGKDYV
DEKQYTVYEKAKKE
Nucleotide
Download Length: 285 bp
>NTDB_id=979019 AAEO79_RS03670 WP_379946609.1 743608..743892(+) (comYC) [Enterococcus devriesei strain Ed-CK-24]
ATGAAAAAAATAGTATCTAAAAAGTTGCCGGGTTTTACTCTTTTAGAAATGCTCGTCGTTTTATTTATCATCAGTCTGCT
TTTGTTGTTGTTCGTGCCAAAATTGATCAATCAAAAAGACGCCGCGCAAAAGAAAAGTGATGCAGCGATCGTCAAAGTAG
TCGAAACGCAGATTCAAGTTTTTGAATTGGATCATGGCCATACGCCAACTAAAGAGGAATTGATTGGAAAAGACTATGTC
GATGAAAAGCAATATACTGTTTATGAAAAAGCAAAAAAAGAATGA
ATGAAAAAAATAGTATCTAAAAAGTTGCCGGGTTTTACTCTTTTAGAAATGCTCGTCGTTTTATTTATCATCAGTCTGCT
TTTGTTGTTGTTCGTGCCAAAATTGATCAATCAAAAAGACGCCGCGCAAAAGAAAAGTGATGCAGCGATCGTCAAAGTAG
TCGAAACGCAGATTCAAGTTTTTGAATTGGATCATGGCCATACGCCAACTAAAGAGGAATTGATTGGAAAAGACTATGTC
GATGAAAAGCAATATACTGTTTATGAAAAAGCAAAAAAAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYC | Streptococcus suis isolate S10 |
61.29 |
98.936 |
0.606 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
50.562 |
94.681 |
0.479 |
| comGC/cglC | Streptococcus mitis SK321 |
45.652 |
97.872 |
0.447 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
45.652 |
97.872 |
0.447 |
| comYC | Streptococcus mutans UA159 |
44.944 |
94.681 |
0.426 |
| comYC | Streptococcus mutans UA140 |
44.944 |
94.681 |
0.426 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
43.478 |
97.872 |
0.426 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
43.478 |
97.872 |
0.426 |
| comGC/cglC | Streptococcus pneumoniae D39 |
43.478 |
97.872 |
0.426 |
| comGC/cglC | Streptococcus pneumoniae R6 |
43.478 |
97.872 |
0.426 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
44.444 |
95.745 |
0.426 |
| comGC | Staphylococcus aureus MW2 |
42.683 |
87.234 |
0.372 |
| comGC | Staphylococcus aureus N315 |
42.683 |
87.234 |
0.372 |