Detailed information NTG0969757

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACJWMC_RS09570
• Genome accession: NZ_CP177181
• Coordinates: 2042858..2043250 (-)
• Length: 130 a.a.
• NCBI ID: WP_002892012.1
• Uniprot ID: J7SHY6
• Organism: Streptococcus salivarius strain MRD1919
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2037858..2048250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMC_RS09530	dapD	2037924..2038622 (-)	699	WP_037598512.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
ACJWMC_RS09535	-	2038708..2039460 (-)	753	WP_037598514.1	HAD family hydrolase	-
ACJWMC_RS09540	-	2039574..2040413 (-)	840	WP_002891996.1	methyltransferase domain-containing protein	-
ACJWMC_RS09550	-	2040836..2040994 (+)	159	WP_002892000.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ACJWMC_RS09555	-	2041015..2041182 (+)	168	WP_002892002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ACJWMC_RS09560	-	2041230..2041484 (+)	255	WP_002892006.1	hypothetical protein	-
ACJWMC_RS09565	tadA	2041570..2042088 (-)	519	WP_037598518.1	tRNA adenosine(34) deaminase TadA	-
ACJWMC_RS09570	ssbA	2042858..2043250 (-)	393	WP_002892012.1	single-stranded DNA-binding protein	Machinery gene
ACJWMC_RS09575	ytpR	2043339..2043962 (-)	624	WP_037598520.1	YtpR family tRNA-binding protein	-
ACJWMC_RS09580	-	2043995..2044519 (-)	525	WP_002892017.1	hypothetical protein	-
ACJWMC_RS09585	-	2044523..2044837 (-)	315	WP_002887006.1	thioredoxin family protein	-
ACJWMC_RS09590	-	2044834..2045118 (-)	285	WP_037598523.1	DUF4651 domain-containing protein	-
ACJWMC_RS09595	pepA	2045218..2046285 (+)	1068	WP_002892022.1	glutamyl aminopeptidase	-
ACJWMC_RS09600	proC	2046301..2047071 (+)	771	WP_002892025.1	pyrroline-5-carboxylate reductase	-
ACJWMC_RS09605	-	2047098..2047760 (-)	663	WP_037598525.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14787.72 Da
• Isoelectric Point: 5.9275

>NTDB_id=969757 ACJWMC_RS09570 WP_002892012.1 2042858..2043250(-) (ssbA) [Streptococcus salivarius strain MRD1919]
MYNKVILIGRLTATPEMVKTVSDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=969757 ACJWMC_RS09570 WP_002892012.1 2042858..2043250(-) (ssbA) [Streptococcus salivarius strain MRD1919]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCTACTCCTGAAATGGTTAAGACTGTTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGATATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACTGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: J7SHY6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385