Detailed information NTG0966125

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: NSQ79_RS09465
• Genome accession: NZ_CP150200
• Coordinates: 2032859..2033251 (-)
• Length: 130 a.a.
• NCBI ID: WP_014632554.1
• Uniprot ID: A0AB37DE84
• Organism: Streptococcus sp. FSL W7-1342
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2027859..2038251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ79_RS09425 (NSQ79_09425)	dapD	2027928..2028626 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
NSQ79_RS09430 (NSQ79_09430)	-	2028712..2029464 (-)	753	WP_002887000.1	HAD family hydrolase	-
NSQ79_RS09435 (NSQ79_09435)	-	2029578..2030417 (-)	840	WP_002887001.1	methyltransferase domain-containing protein	-
NSQ79_RS09445 (NSQ79_09445)	-	2030838..2030996 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
NSQ79_RS09450 (NSQ79_09450)	-	2031016..2031183 (+)	168	WP_002887002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
NSQ79_RS09455 (NSQ79_09455)	-	2031231..2031485 (+)	255	WP_045001373.1	hypothetical protein	-
NSQ79_RS09460 (NSQ79_09460)	tadA	2031571..2032089 (-)	519	WP_014632555.1	tRNA adenosine(34) deaminase TadA	-
NSQ79_RS09465 (NSQ79_09465)	ssbA	2032859..2033251 (-)	393	WP_014632554.1	single-stranded DNA-binding protein	Machinery gene
NSQ79_RS09470 (NSQ79_09470)	-	2033679..2034356 (-)	678	WP_045001371.1	type II CAAX endopeptidase family protein	-
NSQ79_RS09475 (NSQ79_09475)	ytpR	2034622..2035245 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
NSQ79_RS09480 (NSQ79_09480)	-	2035277..2035801 (-)	525	WP_014632552.1	hypothetical protein	-
NSQ79_RS09485 (NSQ79_09485)	-	2035805..2036119 (-)	315	WP_002885723.1	thioredoxin family protein	-
NSQ79_RS09490 (NSQ79_09490)	-	2036116..2036400 (-)	285	WP_002885838.1	DUF4651 domain-containing protein	-
NSQ79_RS09495 (NSQ79_09495)	pepA	2036500..2037567 (+)	1068	WP_014632550.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.71 Da
• Isoelectric Point: 6.9843

>NTDB_id=966125 NSQ79_RS09465 WP_014632554.1 2032859..2033251(-) (ssbA) [Streptococcus sp. FSL W7-1342]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=966125 NSQ79_RS09465 WP_014632554.1 2032859..2033251(-) (ssbA) [Streptococcus sp. FSL W7-1342]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	86.154	0.523
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377