Detailed information
Bioinformatically predicted
Overview
| Name | comC/comC2 | Type | Regulator |
| Locus tag | NYE79_RS09980 | Genome accession | NZ_CP150168 |
| Coordinates | 2045096..2045221 (-) | Length | 41 a.a. |
| NCBI ID | WP_000799678.1 | Uniprot ID | - |
| Organism | Streptococcus sp. FSL W8-0197 | ||
| Function | binding to ComD; induce autophosphorylation of ComD (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2040096..2050221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE79_RS09955 (NYE79_09955) | - | 2042227..2042769 (+) | 543 | WP_000665080.1 | TetR-like C-terminal domain-containing protein | - |
| NYE79_RS09970 (NYE79_09970) | comE | 2043007..2043759 (-) | 753 | WP_000866079.1 | competence system response regulator transcription factor ComE | Regulator |
| NYE79_RS09975 (NYE79_09975) | comD | 2043756..2045075 (-) | 1320 | WP_000362886.1 | competence system sensor histidine kinase ComD | Regulator |
| NYE79_RS09980 (NYE79_09980) | comC/comC2 | 2045096..2045221 (-) | 126 | WP_000799678.1 | competence-stimulating peptide ComC | Regulator |
| NYE79_RS09990 (NYE79_09990) | rlmH | 2045503..2045982 (-) | 480 | WP_000694219.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
| NYE79_RS09995 (NYE79_09995) | htrA | 2046168..2047364 (+) | 1197 | WP_084877132.1 | S1C family serine protease | Regulator |
| NYE79_RS10000 (NYE79_10000) | spo0J | 2047422..2048180 (+) | 759 | WP_216728672.1 | ParB/RepB/Spo0J family partition protein | Regulator |
Sequence
Protein
Download Length: 41 a.a. Molecular weight: 4960.73 Da Isoelectric Point: 10.3052
>NTDB_id=964646 NYE79_RS09980 WP_000799678.1 2045096..2045221(-) (comC/comC2) [Streptococcus sp. FSL W8-0197]
MKNTVKLEQFKEVTEAELQEIRGGDWRISETIRNLIFPRRK
MKNTVKLEQFKEVTEAELQEIRGGDWRISETIRNLIFPRRK
Nucleotide
Download Length: 126 bp
>NTDB_id=964646 NYE79_RS09980 WP_000799678.1 2045096..2045221(-) (comC/comC2) [Streptococcus sp. FSL W8-0197]
ATGAAAAATACAGTAAAGTTGGAACAATTTAAAGAAGTAACAGAGGCAGAATTGCAGGAGATTCGAGGTGGAGATTGGAG
AATTTCAGAAACAATTCGTAATCTTATTTTTCCAAGAAGAAAGTAA
ATGAAAAATACAGTAAAGTTGGAACAATTTAAAGAAGTAACAGAGGCAGAATTGCAGGAGATTCGAGGTGGAGATTGGAG
AATTTCAGAAACAATTCGTAATCTTATTTTTCCAAGAAGAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC/comC2 | Streptococcus pneumoniae A66 |
56.098 |
100 |
0.561 |
| comC/comC2 | Streptococcus pneumoniae TIGR4 |
56.098 |
100 |
0.561 |
| comC | Streptococcus mitis SK321 |
56.098 |
100 |
0.561 |
| comC/comC1 | Streptococcus pneumoniae R6 |
53.659 |
100 |
0.537 |
| comC/comC1 | Streptococcus pneumoniae G54 |
53.659 |
100 |
0.537 |
| comC/comC1 | Streptococcus pneumoniae D39 |
53.659 |
100 |
0.537 |
| comC/comC1 | Streptococcus pneumoniae Rx1 |
53.659 |
100 |
0.537 |
| comC | Streptococcus mitis NCTC 12261 |
47.5 |
97.561 |
0.463 |
| comC/comC2 | Streptococcus gordonii strain NCTC7865 |
43.243 |
90.244 |
0.39 |
| comC/comC1 | Streptococcus gordonii str. Challis substr. CH1 |
39.474 |
92.683 |
0.366 |