Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | QMM27_RS08470 | Genome accession | NZ_AP025939 |
| Coordinates | 1679098..1679493 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain Utah_35B-24 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1674098..1684493
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMM27_RS08445 (Utah35B_16580) | - | 1674443..1674781 (-) | 339 | WP_001809290.1 | helix-turn-helix transcriptional regulator | - |
| QMM27_RS08450 (Utah35B_16590) | - | 1674794..1675567 (-) | 774 | WP_000566048.1 | class I SAM-dependent methyltransferase | - |
| QMM27_RS08455 | - | 1676013..1676768 (-) | 756 | Protein_1661 | epoxyqueuosine reductase QueH | - |
| QMM27_RS08460 (Utah35B_16620) | groL | 1676906..1678528 (-) | 1623 | WP_000031583.1 | chaperonin GroEL | - |
| QMM27_RS08465 (Utah35B_16630) | groES | 1678544..1678828 (-) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| QMM27_RS08470 (Utah35B_16640) | ssbB/cilA | 1679098..1679493 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| QMM27_RS08475 (Utah35B_16650) | - | 1679571..1680332 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| QMM27_RS08480 (Utah35B_16660) | ytpR | 1680365..1680991 (-) | 627 | WP_000578285.1 | YtpR family tRNA-binding protein | - |
| QMM27_RS08485 (Utah35B_16670) | - | 1681007..1681324 (-) | 318 | WP_000615776.1 | thioredoxin family protein | - |
| QMM27_RS08490 (Utah35B_16680) | - | 1681321..1681620 (-) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| QMM27_RS08495 | - | 1681714..1681845 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| QMM27_RS08500 (Utah35B_16690) | - | 1681870..1682067 (-) | 198 | Protein_1670 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| QMM27_RS08505 (Utah35B_16700) | - | 1682309..1682983 (-) | 675 | WP_000725750.1 | membrane protein | - |
| QMM27_RS08510 (Utah35B_16710) | - | 1682989..1683435 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| QMM27_RS08515 | - | 1683549..1684052 (-) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| QMM27_RS08520 (Utah35B_16720) | - | 1684049..1684411 (-) | 363 | WP_000078804.1 | DUF2200 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=95451 QMM27_RS08470 WP_000282467.1 1679098..1679493(-) (ssbB/cilA) [Streptococcus pneumoniae strain Utah_35B-24]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=95451 QMM27_RS08470 WP_000282467.1 1679098..1679493(-) (ssbB/cilA) [Streptococcus pneumoniae strain Utah_35B-24]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |