Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | QMM10_RS08800 | Genome accession | NZ_AP025938 |
| Coordinates | 1744818..1745213 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain PZ900701057 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1739818..1750213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMM10_RS08775 (PC1044_17160) | - | 1740016..1740549 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| QMM10_RS08780 (PC1044_17170) | - | 1740903..1741109 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| QMM10_RS08785 (PC1044_17180) | - | 1741269..1742527 (+) | 1259 | WP_281055090.1 | ISL3 family transposase | - |
| QMM10_RS08790 (PC1044_17200) | groL | 1742626..1744248 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| QMM10_RS08795 (PC1044_17210) | groES | 1744264..1744548 (-) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| QMM10_RS08800 (PC1044_17220) | ssbB/cilA | 1744818..1745213 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| QMM10_RS08805 (PC1044_17240) | - | 1745291..1746052 (-) | 762 | Protein_1728 | SDR family NAD(P)-dependent oxidoreductase | - |
| QMM10_RS08810 (PC1044_17250) | ytpR | 1746085..1746711 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| QMM10_RS08815 (PC1044_17260) | - | 1746727..1747044 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| QMM10_RS08820 (PC1044_17270) | - | 1747041..1747340 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| QMM10_RS08825 | - | 1747434..1747565 (+) | 132 | WP_050207302.1 | hypothetical protein | - |
| QMM10_RS08830 (PC1044_17280) | - | 1747590..1747787 (-) | 198 | Protein_1733 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| QMM10_RS08835 (PC1044_17290) | - | 1748029..1748703 (-) | 675 | WP_000725750.1 | membrane protein | - |
| QMM10_RS08840 (PC1044_17300) | - | 1748709..1749155 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| QMM10_RS08845 | - | 1749269..1749772 (-) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| QMM10_RS08850 (PC1044_17310) | - | 1749769..1750131 (-) | 363 | WP_000078804.1 | DUF2200 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=95373 QMM10_RS08800 WP_000282467.1 1744818..1745213(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701057]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=95373 QMM10_RS08800 WP_000282467.1 1744818..1745213(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900701057]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |