Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACFW98_RS13835 Genome accession   NZ_CP170719
Coordinates   2866607..2867434 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain JP5008     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2861607..2872434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFW98_RS13810 (ACFW98_13810) - 2862682..2864115 (+) 1434 WP_395096526.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACFW98_RS13815 (ACFW98_13815) tmk 2864112..2864750 (+) 639 WP_007409918.1 dTMP kinase -
  ACFW98_RS13820 (ACFW98_13820) darA 2864821..2865150 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  ACFW98_RS13825 (ACFW98_13825) - 2865163..2865603 (+) 441 WP_004264730.1 YaaR family protein -
  ACFW98_RS13830 (ACFW98_13830) holB 2865615..2866604 (+) 990 WP_031379324.1 DNA polymerase III subunit delta' -
  ACFW98_RS13835 (ACFW98_13835) yaaT 2866607..2867434 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  ACFW98_RS13840 (ACFW98_13840) yabA 2867449..2867808 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  ACFW98_RS13845 (ACFW98_13845) - 2867869..2868612 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACFW98_RS13850 (ACFW98_13850) - 2868599..2868898 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  ACFW98_RS13855 (ACFW98_13855) rsmI 2868873..2869754 (+) 882 WP_053573815.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACFW98_RS13860 (ACFW98_13860) abrB 2869804..2870094 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=945220 ACFW98_RS13835 WP_004264723.1 2866607..2867434(+) (yaaT) [Bacillus amyloliquefaciens strain JP5008]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=945220 ACFW98_RS13835 WP_004264723.1 2866607..2867434(+) (yaaT) [Bacillus amyloliquefaciens strain JP5008]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCAATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTAAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967