Detailed information NTG0940762

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V6U69_RS00820
• Genome accession: NZ_CP145867
• Coordinates: 145697..146089 (+)
• Length: 130 a.a.
• NCBI ID: WP_410533921.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS10
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 140697..151089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U69_RS00785 (V6U69_00785)	pepA	141111..142178 (-)	1068	WP_013991256.1	glutamyl aminopeptidase	-
V6U69_RS00790 (V6U69_00790)	-	142278..142562 (+)	285	WP_013991255.1	DUF4651 domain-containing protein	-
V6U69_RS00795 (V6U69_00795)	-	142559..142873 (+)	315	WP_013991254.1	thioredoxin family protein	-
V6U69_RS00800 (V6U69_00800)	-	142877..143401 (+)	525	WP_183136449.1	hypothetical protein	-
V6U69_RS00805 (V6U69_00805)	ytpR	143434..144057 (+)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
V6U69_RS00810 (V6U69_00810)	-	144195..145226 (+)	1032	WP_037601491.1	YeeE/YedE family protein	-
V6U69_RS00815 (V6U69_00815)	-	145241..145468 (+)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
V6U69_RS00820 (V6U69_00820)	ssbA	145697..146089 (+)	393	WP_410533921.1	single-stranded DNA-binding protein	Machinery gene
V6U69_RS00825 (V6U69_00825)	tadA	146859..147377 (+)	519	WP_014635105.1	tRNA adenosine(34) deaminase TadA	-
V6U69_RS00830 (V6U69_00830)	-	147464..147715 (-)	252	WP_014635104.1	hypothetical protein	-
V6U69_RS00835 (V6U69_00835)	-	147763..147930 (-)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U69_RS00840 (V6U69_00840)	-	147950..148108 (-)	159	WP_014635103.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U69_RS00850 (V6U69_00850)	-	148530..149369 (+)	840	WP_073686088.1	methyltransferase domain-containing protein	-
V6U69_RS00855 (V6U69_00855)	-	149483..150235 (+)	753	WP_014635101.1	HAD family hydrolase	-
V6U69_RS00860 (V6U69_00860)	dapD	150321..151019 (+)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14801.75 Da
• Isoelectric Point: 5.9275

>NTDB_id=940762 V6U69_RS00820 WP_410533921.1 145697..146089(+) (ssbA) [Streptococcus salivarius strain KSS10]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLVSYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAIRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=940762 V6U69_RS00820 WP_410533921.1 145697..146089(+) (ssbA) [Streptococcus salivarius strain KSS10]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACAGCGACTCCTGAAATGGTAAAAACTGCTAGTGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGTATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTATTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.808
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.777
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	62.5	86.154	0.538
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377