Detailed information NTG0940605

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V6U66_RS09845
• Genome accession: NZ_CP145864
• Coordinates: 2098869..2099261 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain KSS7
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2093869..2104261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U66_RS09805 (V6U66_09785)	dapD	2093950..2094648 (-)	699	WP_048674201.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
V6U66_RS09810 (V6U66_09790)	-	2094734..2095486 (-)	753	WP_410534497.1	HAD family hydrolase	-
V6U66_RS09815 (V6U66_09795)	-	2095599..2096438 (-)	840	WP_410534498.1	methyltransferase domain-containing protein	-
V6U66_RS09825 (V6U66_09805)	-	2096859..2097017 (+)	159	WP_037611110.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U66_RS09830 (V6U66_09810)	-	2097038..2097205 (+)	168	WP_037611109.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U66_RS09835 (V6U66_09815)	-	2097253..2097504 (+)	252	WP_014635104.1	hypothetical protein	-
V6U66_RS09840 (V6U66_09820)	tadA	2097591..2098109 (-)	519	WP_037611108.1	tRNA adenosine(34) deaminase TadA	-
V6U66_RS09845 (V6U66_09825)	ssbA	2098869..2099261 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
V6U66_RS09850 (V6U66_09830)	-	2099691..2100368 (-)	678	WP_410534499.1	CPBP family intramembrane glutamic endopeptidase	-
V6U66_RS09855 (V6U66_09835)	ytpR	2100636..2101259 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
V6U66_RS09860 (V6U66_09840)	-	2101291..2101815 (-)	525	WP_410534500.1	hypothetical protein	-
V6U66_RS09865 (V6U66_09845)	-	2101819..2102133 (-)	315	WP_002887006.1	thioredoxin family protein	-
V6U66_RS09870 (V6U66_09850)	-	2102130..2102414 (-)	285	WP_002885838.1	DUF4651 domain-containing protein	-
V6U66_RS09875 (V6U66_09855)	pepA	2102514..2103581 (+)	1068	WP_221739285.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=940605 V6U66_RS09845 WP_002885697.1 2098869..2099261(-) (ssbA) [Streptococcus salivarius strain KSS7]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=940605 V6U66_RS09845 WP_002885697.1 2098869..2099261(-) (ssbA) [Streptococcus salivarius strain KSS7]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGTGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385