Detailed information NTG0911495

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: U0449_RS06185
• Genome accession: NZ_CP139862
• Coordinates: 1230954..1231358 (+)
• Length: 134 a.a.
• NCBI ID: WP_322398090.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 05H0020-2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1225954..1236358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0449_RS06160	-	1227078..1228136 (+)	1059	WP_000649473.1	zinc-dependent alcohol dehydrogenase family protein	-
U0449_RS06165	-	1228287..1228652 (+)	366	WP_000286415.1	DUF1033 family protein	-
U0449_RS06170	comGA/cglA/cilD	1228728..1229669 (+)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
U0449_RS06175	comGB/cglB	1229617..1230633 (+)	1017	WP_078136505.1	competence type IV pilus assembly protein ComGB	Machinery gene
U0449_RS06180	comGC/cglC	1230635..1230961 (+)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
U0449_RS06185	comGD/cglD	1230954..1231358 (+)	405	WP_322398090.1	competence type IV pilus minor pilin ComGD	Machinery gene
U0449_RS06190	comGE/cglE	1231321..1231623 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
U0449_RS06195	comGF/cglF	1231586..1232047 (+)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
U0449_RS06200	comGG/cglG	1232025..1232438 (+)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
U0449_RS06205	-	1232575..1233169 (+)	595	Protein_1212	class I SAM-dependent methyltransferase	-
U0449_RS06210	comYH	1233230..1234183 (+)	954	WP_050219032.1	class I SAM-dependent methyltransferase	Machinery gene
U0449_RS06215	-	1234234..1235424 (+)	1191	WP_000167753.1	acetate kinase	-
U0449_RS06220	-	1235425..1235556 (+)	132	WP_000768904.1	hypothetical protein	-
U0449_RS06225	rnpA	1235573..1235944 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14696.86 Da
• Isoelectric Point: 10.0319

>NTDB_id=911495 U0449_RS06185 WP_322398090.1 1230954..1231358(+) (comGD/cglD) [Streptococcus pneumoniae strain 05H0020-2]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGEIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=911495 U0449_RS06185 WP_322398090.1 1230954..1231358(+) (comGD/cglD) [Streptococcus pneumoniae strain 05H0020-2]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGAGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47