Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   ABI226_RS20070 Genome accession   NZ_CP157216
Coordinates   3813786..3814160 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS22     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3808786..3819160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABI226_RS20045 (ABI226_20045) - 3808950..3809111 (-) 162 WP_003227632.1 hypothetical protein -
  ABI226_RS20050 (ABI226_20050) glpX 3809326..3810291 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  ABI226_RS20055 (ABI226_20055) murAB 3810322..3811611 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ABI226_RS20060 (ABI226_20060) fsa 3811990..3812628 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  ABI226_RS20065 (ABI226_20065) fbaA 3812748..3813605 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  ABI226_RS20070 (ABI226_20070) letA 3813786..3814160 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  ABI226_RS20075 (ABI226_20075) ywjG 3814326..3814847 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  ABI226_RS20080 (ABI226_20080) pyrG 3814929..3816536 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  ABI226_RS20085 (ABI226_20085) rpoE 3816778..3817299 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  ABI226_RS20090 (ABI226_20090) acdA 3817482..3818621 (-) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=903246 ABI226_RS20070 WP_003227621.1 3813786..3814160(-) (letA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=903246 ABI226_RS20070 WP_003227621.1 3813786..3814160(-) (letA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363