Detailed information NTG0896187

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R4701_RS06305
• Genome accession: NZ_CP137114
• Coordinates: 1252544..1252948 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 15P3054
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1247544..1257948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4701_RS06280	-	1248668..1249726 (+)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-
R4701_RS06285	-	1249877..1250242 (+)	366	WP_000286415.1	DUF1033 family protein	-
R4701_RS06290	comGA/cglA/cilD	1250318..1251259 (+)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R4701_RS06295	comGB/cglB	1251207..1252223 (+)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
R4701_RS06300	comGC/cglC	1252225..1252551 (+)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
R4701_RS06305	comGD/cglD	1252544..1252948 (+)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4701_RS06310	comGE/cglE	1252911..1253213 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4701_RS06315	comGF/cglF	1253176..1253637 (+)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4701_RS06320	comGG/cglG	1253615..1254028 (+)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4701_RS06325	-	1254165..1254759 (+)	595	Protein_1234	class I SAM-dependent methyltransferase	-
R4701_RS06330	comYH	1254820..1255773 (+)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
R4701_RS06335	-	1255824..1257014 (+)	1191	WP_000167757.1	acetate kinase	-
R4701_RS06340	-	1257015..1257146 (+)	132	WP_000768904.1	hypothetical protein	-
R4701_RS06345	rnpA	1257163..1257534 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=896187 R4701_RS06305 WP_000588023.1 1252544..1252948(+) (comGD/cglD) [Streptococcus pneumoniae strain 15P3054]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=896187 R4701_RS06305 WP_000588023.1 1252544..1252948(+) (comGD/cglD) [Streptococcus pneumoniae strain 15P3054]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47