Detailed information NTG0892707

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: ABDT80_RS18190
• Genome accession: NZ_CP152465
• Coordinates: 3703046..3704029 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Sel(0 hit star)
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3698046..3709029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDT80_RS18165	bcsF	3698207..3698398 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
ABDT80_RS18170	bcsG	3698395..3700074 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
ABDT80_RS18175	ldrD	3700161..3700268 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
ABDT80_RS18180	yhjV	3700744..3702015 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
ABDT80_RS18185	dppF	3702045..3703049 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
ABDT80_RS18190	amiE	3703046..3704029 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
ABDT80_RS18195	dppC	3704040..3704942 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
ABDT80_RS18200	dppB	3704952..3705971 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
ABDT80_RS18205	-	3706135..3706245 (+)	111	Protein_3555	hypothetical protein	-
ABDT80_RS18210	dppA	3706279..3707886 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=892707 ABDT80_RS18190 WP_001196486.1 3703046..3704029(-) (amiE) [Escherichia coli strain Sel(0 hit star)]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=892707 ABDT80_RS18190 WP_001196486.1 3703046..3704029(-) (amiE) [Escherichia coli strain Sel(0 hit star)]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404