Detailed information NTG0885543

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RNZ41_RS02780
• Genome accession: NZ_CP135138
• Coordinates: 602156..603307 (-)
• Length: 383 a.a.
• NCBI ID: WP_007117195.1
• Uniprot ID: -
• Organism: Moraxella sp. DOX410
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 597156..608307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RNZ41_RS02770 (RNZ41_02770)	ribF	600422..601435 (-)	1014	WP_314027522.1	riboflavin biosynthesis protein RibF	-
RNZ41_RS02775 (RNZ41_02775)	-	601561..602085 (+)	525	WP_314027523.1	GNAT family N-acetyltransferase	-
RNZ41_RS02780 (RNZ41_02780)	pilU	602156..603307 (-)	1152	WP_007117195.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
RNZ41_RS02785 (RNZ41_02785)	pilT	603357..604406 (-)	1050	WP_007117194.1	type IV pilus twitching motility protein PilT	Machinery gene
RNZ41_RS02790 (RNZ41_02790)	-	604667..605392 (+)	726	WP_314027524.1	YggS family pyridoxal phosphate-dependent enzyme	-
RNZ41_RS02795 (RNZ41_02795)	-	605818..606342 (+)	525	WP_312523359.1	C40 family peptidase	-
RNZ41_RS02800 (RNZ41_02800)	-	606680..608029 (+)	1350	WP_007117190.1	sensor domain-containing diguanylate cyclase	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 42666.95 Da
• Isoelectric Point: 5.8313

>NTDB_id=885543 RNZ41_RS02780 WP_007117195.1 602156..603307(-) (pilU) [Moraxella sp. DOX410]
MDLDKLLQLMIQKNGSDLFITADAPISMKVNGTIAPVTKSALTPEQSMTLVKSVMTPAQSKEFDDTLECQFAIVDKNQTA
RFRVSAFVQKDCAGMVLRKIETKIPTVEQLNLPPILNEIAMKKRGIVLLVGATGTGKSTTLAAMMGYRNENSRGHIITIE
DPIEYLHEHKGCIITQREVGIDTKSFEAGLKNALRQAPDVILIGEIRTRETMDYAIQYAETGHLVFATLHATNANQALER
IIHFFEAKHHEQILMDLSLNLRAIVAQQLIATPDGKGRRPAIEILLNSQLIGDYIRKGEIHEIKPVMKRSREIGMQTFDQ
ALFDLYENGDITYRDAIQHADSPNDLRLLIKLESKSANKTEESELELSLQSDDNSAANDNAIS

Nucleotide

• Length: 1152 bp

>NTDB_id=885543 RNZ41_RS02780 WP_007117195.1 602156..603307(-) (pilU) [Moraxella sp. DOX410]
ATGGATCTTGATAAATTACTGCAGCTAATGATACAAAAAAACGGCTCCGACCTTTTTATCACCGCCGATGCGCCCATATC
AATGAAAGTCAATGGTACTATCGCGCCAGTCACCAAGTCAGCGCTGACCCCAGAGCAATCAATGACGCTGGTCAAAAGCG
TGATGACGCCTGCTCAAAGCAAAGAGTTTGACGACACCCTAGAATGCCAGTTTGCCATTGTTGACAAAAACCAAACCGCA
CGCTTTCGTGTTTCTGCCTTTGTCCAAAAAGACTGTGCGGGCATGGTGCTACGTAAAATTGAAACCAAAATCCCAACGGT
AGAGCAACTCAATCTACCACCGATTTTGAATGAAATTGCCATGAAAAAACGCGGCATCGTGCTACTAGTCGGCGCGACAG
GTACAGGTAAATCTACCACACTGGCAGCTATGATGGGGTATCGCAACGAGAATTCGCGCGGTCATATCATTACTATCGAA
GACCCGATTGAATACCTGCATGAACATAAAGGCTGTATCATCACCCAACGCGAAGTTGGCATTGATACCAAGTCATTTGA
AGCAGGATTAAAAAACGCCCTACGTCAAGCACCTGATGTGATTTTGATTGGCGAGATTCGTACCCGCGAAACCATGGATT
ATGCCATTCAATATGCTGAAACAGGACACTTGGTGTTTGCCACCCTACACGCCACCAATGCCAACCAAGCGCTTGAGCGT
ATTATTCACTTCTTTGAAGCAAAACATCACGAGCAGATTTTGATGGATTTATCATTAAACCTTCGAGCCATTGTGGCGCA
GCAATTGATTGCTACCCCTGATGGCAAAGGTCGCCGCCCTGCGATTGAAATTTTGCTCAATTCGCAACTGATTGGTGATT
ACATCCGTAAAGGGGAAATCCACGAAATTAAGCCTGTCATGAAACGTTCCCGTGAAATTGGGATGCAAACCTTTGACCAA
GCGTTGTTTGATTTGTATGAAAATGGCGACATCACTTACCGCGATGCCATCCAACACGCTGATTCACCCAACGATTTACG
CCTACTTATTAAGCTAGAGAGTAAATCGGCCAATAAAACCGAGGAAAGCGAGCTGGAGCTCTCACTGCAATCTGATGATA
ATAGCGCAGCCAATGACAATGCAATATCCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	63.564	98.172	0.624
pilU	Acinetobacter baylyi ADP1	64.345	93.734	0.603
pilU	Vibrio cholerae strain A1552	55.84	91.645	0.512
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.311	91.645	0.379
pilT	Acinetobacter nosocomialis M2	40.525	89.556	0.363
pilT	Acinetobacter baumannii D1279779	40.525	89.556	0.363
pilT	Acinetobacter baumannii strain A118	40.525	89.556	0.363
pilT	Legionella pneumophila strain Lp02	40.588	88.773	0.36
pilT	Legionella pneumophila strain ERS1305867	40.588	88.773	0.36