Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | RNZ41_RS02785 | Genome accession | NZ_CP135138 |
| Coordinates | 603357..604406 (-) | Length | 349 a.a. |
| NCBI ID | WP_007117194.1 | Uniprot ID | - |
| Organism | Moraxella sp. DOX410 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 598357..609406
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RNZ41_RS02770 (RNZ41_02770) | ribF | 600422..601435 (-) | 1014 | WP_314027522.1 | riboflavin biosynthesis protein RibF | - |
| RNZ41_RS02775 (RNZ41_02775) | - | 601561..602085 (+) | 525 | WP_314027523.1 | GNAT family N-acetyltransferase | - |
| RNZ41_RS02780 (RNZ41_02780) | pilU | 602156..603307 (-) | 1152 | WP_007117195.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| RNZ41_RS02785 (RNZ41_02785) | pilT | 603357..604406 (-) | 1050 | WP_007117194.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| RNZ41_RS02790 (RNZ41_02790) | - | 604667..605392 (+) | 726 | WP_314027524.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| RNZ41_RS02795 (RNZ41_02795) | - | 605818..606342 (+) | 525 | WP_312523359.1 | C40 family peptidase | - |
| RNZ41_RS02800 (RNZ41_02800) | - | 606680..608029 (+) | 1350 | WP_007117190.1 | sensor domain-containing diguanylate cyclase | - |
| RNZ41_RS02805 (RNZ41_02805) | truD | 608064..609152 (-) | 1089 | WP_314027525.1 | tRNA pseudouridine(13) synthase TruD | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38916.62 Da Isoelectric Point: 6.7822
>NTDB_id=885544 RNZ41_RS02785 WP_007117194.1 603357..604406(-) (pilT) [Moraxella sp. DOX410]
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
MAKELSIDDLLRFAFKNKASDLHISAGLPPMIRVDGEITKINMPPLDHQKVHSLIYDIMNDKQRADYEEFFETDFSFEIP
NVARFRVNAFNQNRGAGAVFRTIPSEVLTMEQLGMGPIFEKISNYKRGVVLVTGPTGSGKSTTLAAMINYINETRKEHIL
TIEDPIEFVHQSKKSLINQREVHRDTLSFDAALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKT
IDRVVDVFPAAEKDMIRAMLSESLQAVISQSLLKRQAGGRVAAHEIMIGTPAIRNLIRENKVAQMYSAIQTSAGDGMTTL
DQSLRELVNKGVISKESARQYAKQPENFM
Nucleotide
Download Length: 1050 bp
>NTDB_id=885544 RNZ41_RS02785 WP_007117194.1 603357..604406(-) (pilT) [Moraxella sp. DOX410]
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATTACCAAAATCAACATGCCACCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACTATTCCATCTGAGGT
ATTGACGATGGAGCAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACAGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGTGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAATCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGCACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGTGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
ATGGCAAAGGAATTATCGATTGACGATTTGTTGCGTTTTGCATTCAAAAATAAAGCCTCTGACTTACACATTTCAGCAGG
CTTACCGCCGATGATTCGGGTAGATGGTGAAATTACCAAAATCAACATGCCACCGCTTGATCACCAAAAAGTGCATAGTT
TGATTTATGACATCATGAACGACAAACAACGTGCCGATTATGAAGAGTTTTTTGAAACCGATTTTTCGTTTGAAATTCCC
AATGTGGCGCGCTTTCGTGTCAATGCCTTTAACCAAAACCGGGGCGCAGGTGCGGTATTTCGTACTATTCCATCTGAGGT
ATTGACGATGGAGCAGCTTGGTATGGGACCGATTTTTGAGAAAATCTCTAACTACAAACGCGGCGTGGTACTGGTCACAG
GTCCAACAGGTTCGGGTAAGTCAACAACCCTTGCGGCGATGATTAACTATATCAATGAAACCCGTAAAGAACATATCTTA
ACCATCGAAGACCCGATTGAATTTGTGCATCAATCAAAAAAATCCCTCATCAACCAACGTGAAGTCCACCGTGATACCTT
AAGCTTTGATGCTGCGCTGCGCTCTGCCCTACGTGAAGACCCTGATGTTATTCTTGTCGGTGAGATGCGTGACCTTGAGA
CCATCCGCTTGGCATTGACGGCTGCTGAAACAGGACACTTGGTATTTGGGACATTGCATACCTCATCTGCTGCCAAAACC
ATTGACCGTGTGGTCGACGTGTTCCCCGCCGCCGAAAAAGACATGATTCGAGCGATGTTATCTGAGTCGCTGCAAGCGGT
TATCTCGCAATCGCTACTCAAACGCCAAGCGGGTGGTCGTGTCGCCGCGCATGAAATTATGATTGGCACGCCTGCGATTC
GTAACTTGATTCGTGAAAACAAAGTCGCCCAAATGTACTCTGCCATCCAAACCAGTGCAGGCGATGGTATGACCACACTC
GATCAAAGCCTTCGTGAGTTGGTCAATAAGGGCGTGATTAGCAAAGAATCGGCGCGCCAATATGCCAAACAACCTGAAAA
TTTTATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii D1279779 |
80 |
98.854 |
0.791 |
| pilT | Acinetobacter baumannii strain A118 |
80 |
98.854 |
0.791 |
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
98.567 |
0.765 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.326 |
98.567 |
0.762 |
| pilT | Acinetobacter baylyi ADP1 |
76.744 |
98.567 |
0.756 |
| pilT | Legionella pneumophila strain Lp02 |
74.26 |
96.848 |
0.719 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.26 |
96.848 |
0.719 |
| pilT | Neisseria meningitidis 8013 |
67.536 |
98.854 |
0.668 |
| pilT | Neisseria gonorrhoeae MS11 |
67.246 |
98.854 |
0.665 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.976 |
95.129 |
0.656 |
| pilT | Vibrio cholerae strain A1552 |
68.976 |
95.129 |
0.656 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.436 |
100 |
0.524 |
| pilU | Acinetobacter baylyi ADP1 |
41.329 |
99.14 |
0.41 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
97.135 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
40 |
95.989 |
0.384 |