Detailed information NTG0882417

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: RL453_RS13310
• Genome accession: NZ_CP134618
• Coordinates: 2709926..2710237 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain IPLA15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2704926..2715237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RL453_RS13280 (RL453_13265)	-	2705709..2705912 (+)	204	WP_000087561.1	YqgQ family protein	-
RL453_RS13285 (RL453_13270)	-	2705909..2706895 (+)	987	WP_000161314.1	ROK family glucokinase	-
RL453_RS13290 (RL453_13275)	-	2706895..2707224 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
RL453_RS13295 (RL453_13280)	-	2707221..2707844 (+)	624	WP_001223010.1	MBL fold metallo-hydrolase	-
RL453_RS13300 (RL453_13285)	comGA	2707896..2708870 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
RL453_RS13305 (RL453_13290)	comGB	2708842..2709912 (+)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
RL453_RS13310 (RL453_13295)	comGC	2709926..2710237 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
RL453_RS13315 (RL453_13300)	comGD	2710215..2710661 (+)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
RL453_RS13320 (RL453_13305)	comGE	2710648..2710947 (+)	300	WP_000844413.1	hypothetical protein	Machinery gene
RL453_RS13325 (RL453_13310)	comGF	2710865..2711362 (+)	498	WP_001789864.1	competence type IV pilus minor pilin ComGF	Machinery gene
RL453_RS13330 (RL453_13315)	-	2711459..2711605 (+)	147	WP_001789879.1	hypothetical protein	-
RL453_RS13335 (RL453_13320)	-	2711595..2712119 (+)	525	WP_001015121.1	shikimate kinase	-
RL453_RS13340 (RL453_13325)	gcvT	2712278..2713369 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
RL453_RS13345 (RL453_13330)	gcvPA	2713389..2714735 (+)	1347	WP_274513757.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=882417 RL453_RS13310 WP_000472256.1 2709926..2710237(+) (comGC) [Staphylococcus aureus strain IPLA15]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=882417 RL453_RS13310 WP_000472256.1 2709926..2710237(+) (comGC) [Staphylococcus aureus strain IPLA15]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369