Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RL453_RS13320 | Genome accession | NZ_CP134618 |
| Coordinates | 2710648..2710947 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain IPLA15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2705648..2715947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL453_RS13280 (RL453_13265) | - | 2705709..2705912 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RL453_RS13285 (RL453_13270) | - | 2705909..2706895 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RL453_RS13290 (RL453_13275) | - | 2706895..2707224 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RL453_RS13295 (RL453_13280) | - | 2707221..2707844 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| RL453_RS13300 (RL453_13285) | comGA | 2707896..2708870 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RL453_RS13305 (RL453_13290) | comGB | 2708842..2709912 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RL453_RS13310 (RL453_13295) | comGC | 2709926..2710237 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RL453_RS13315 (RL453_13300) | comGD | 2710215..2710661 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RL453_RS13320 (RL453_13305) | comGE | 2710648..2710947 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RL453_RS13325 (RL453_13310) | comGF | 2710865..2711362 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RL453_RS13330 (RL453_13315) | - | 2711459..2711605 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RL453_RS13335 (RL453_13320) | - | 2711595..2712119 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| RL453_RS13340 (RL453_13325) | gcvT | 2712278..2713369 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RL453_RS13345 (RL453_13330) | gcvPA | 2713389..2714735 (+) | 1347 | WP_274513757.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=882419 RL453_RS13320 WP_000844413.1 2710648..2710947(+) (comGE) [Staphylococcus aureus strain IPLA15]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=882419 RL453_RS13320 WP_000844413.1 2710648..2710947(+) (comGE) [Staphylococcus aureus strain IPLA15]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |