Detailed information NTG0880702

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: RKV26_RS08040
• Genome accession: NZ_CP134532
• Coordinates: 1639187..1639498 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KNIH_6268
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1634187..1644498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKV26_RS08005	gcvPA	1634689..1636035 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
RKV26_RS08010	gcvT	1636055..1637146 (-)	1092	WP_267815012.1	glycine cleavage system aminomethyltransferase GcvT	-
RKV26_RS08015	-	1637305..1637829 (-)	525	WP_001015122.1	shikimate kinase	-
RKV26_RS08020	-	1637819..1637965 (-)	147	WP_001789879.1	hypothetical protein	-
RKV26_RS08025	comGF	1638062..1638559 (-)	498	WP_154284346.1	competence type IV pilus minor pilin ComGF	Machinery gene
RKV26_RS08030	comGE	1638477..1638776 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
RKV26_RS08035	comGD	1638763..1639167 (-)	405	WP_209205909.1	competence type IV pilus minor pilin ComGD	Machinery gene
RKV26_RS08040	comGC	1639187..1639498 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
RKV26_RS08045	comGB	1639512..1640582 (-)	1071	WP_000776403.1	competence type IV pilus assembly protein ComGB	Machinery gene
RKV26_RS08050	comGA	1640554..1641528 (-)	975	WP_000697215.1	competence type IV pilus ATPase ComGA	Machinery gene
RKV26_RS08055	-	1641580..1642203 (-)	624	WP_267815017.1	MBL fold metallo-hydrolase	-
RKV26_RS08060	-	1642200..1642529 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
RKV26_RS08065	-	1642529..1643515 (-)	987	WP_000161315.1	ROK family glucokinase	-
RKV26_RS08070	-	1643512..1643715 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=880702 RKV26_RS08040 WP_000472256.1 1639187..1639498(-) (comGC) [Staphylococcus aureus strain KNIH_6268]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=880702 RKV26_RS08040 WP_000472256.1 1639187..1639498(-) (comGC) [Staphylococcus aureus strain KNIH_6268]
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATTATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369