Detailed information NTG0869387

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: RAL98_RS09345
• Genome accession: NZ_CP132544
• Coordinates: 1869804..1870124 (-)
• Length: 106 a.a.
• NCBI ID: WP_251520656.1
• Uniprot ID: -
• Organism: Staphylococcus sp. HKU1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1864804..1875124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAL98_RS09310 (RAL98_09285)	gcvPA	1865338..1866687 (-)	1350	WP_251520671.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
RAL98_RS09315 (RAL98_09290)	gcvT	1866705..1867796 (-)	1092	WP_251520668.1	glycine cleavage system aminomethyltransferase GcvT	-
RAL98_RS09320 (RAL98_09295)	-	1868008..1868481 (-)	474	WP_251520970.1	shikimate kinase	-
RAL98_RS09325 (RAL98_09300)	-	1868513..1868647 (-)	135	WP_418128668.1	hypothetical protein	-
RAL98_RS09330 (RAL98_09305)	-	1868688..1869125 (-)	438	WP_251520665.1	ComGF family competence protein	-
RAL98_RS09335 (RAL98_09310)	-	1869100..1869396 (-)	297	WP_251520662.1	hypothetical protein	-
RAL98_RS09340 (RAL98_09315)	-	1869377..1869784 (-)	408	WP_418128670.1	competence protein	-
RAL98_RS09345 (RAL98_09320)	comGC	1869804..1870124 (-)	321	WP_251520656.1	competence type IV pilus major pilin ComGC	Machinery gene
RAL98_RS09350 (RAL98_09325)	comGB	1870142..1871209 (-)	1068	WP_251942891.1	competence type IV pilus assembly protein ComGB	-
RAL98_RS09355 (RAL98_09330)	comGA	1871181..1872155 (-)	975	Protein_1795	competence type IV pilus ATPase ComGA	-
RAL98_RS09360 (RAL98_09335)	-	1872208..1872831 (-)	624	WP_251520650.1	MBL fold metallo-hydrolase	-
RAL98_RS09365 (RAL98_09340)	-	1872831..1873157 (-)	327	WP_251520646.1	MTH1187 family thiamine-binding protein	-
RAL98_RS09370 (RAL98_09345)	-	1873157..1874143 (-)	987	WP_251942885.1	glucokinase	-
RAL98_RS09375 (RAL98_09350)	-	1874543..1874746 (-)	204	WP_251520638.1	YqgQ family protein	-

Sequence

Protein

• Length: 106 a.a.
• Molecular weight: 11751.01 Da
• Isoelectric Point: 10.0503

>NTDB_id=869387 RAL98_RS09345 WP_251520656.1 1869804..1870124(-) (comGC) [Staphylococcus sp. HKU1]
MKKNLKVIKTKAFTLIEMLLVLLIISLLLILIIPNIAKQSKHIQSTGCEAQIKMVESQIEAYTLKHNKKPDSIEILVSEG
YIKSNQKQCKNGSTLSINNGEVVASS

Nucleotide

• Length: 321 bp

>NTDB_id=869387 RAL98_RS09345 WP_251520656.1 1869804..1870124(-) (comGC) [Staphylococcus sp. HKU1]
ATGAAGAAAAATTTAAAAGTTATTAAAACTAAAGCATTTACTTTGATTGAAATGTTACTCGTGCTTTTAATTATAAGTTT
GTTACTTATTTTAATCATTCCAAATATAGCGAAACAATCTAAACATATTCAATCTACAGGGTGTGAGGCTCAAATAAAAA
TGGTTGAGAGTCAAATCGAAGCTTACACATTGAAACATAATAAAAAGCCAGATTCGATCGAAATCCTCGTATCAGAAGGT
TATATTAAGAGTAATCAAAAACAATGTAAAAATGGTTCAACTTTATCTATAAATAATGGTGAAGTAGTTGCGAGTTCTTA
A

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	74.227	91.509	0.679
comGC	Staphylococcus aureus N315	74.227	91.509	0.679
comYC	Streptococcus suis isolate S10	46.739	86.792	0.406
comGC	Bacillus subtilis subsp. subtilis str. 168	46.739	86.792	0.406
comGC/cglC	Streptococcus mitis NCTC 12261	42.574	95.283	0.406
comGC/cglC	Streptococcus pneumoniae D39	43.75	90.566	0.396
comGC/cglC	Streptococcus pneumoniae R6	43.75	90.566	0.396
comGC/cglC	Streptococcus pneumoniae Rx1	43.75	90.566	0.396
comGC/cglC	Streptococcus pneumoniae TIGR4	43.75	90.566	0.396
comYC	Streptococcus mutans UA140	48.837	81.132	0.396
comYC	Streptococcus mutans UA159	48.837	81.132	0.396
comGC	Lactococcus lactis subsp. cremoris KW2	51.899	74.528	0.387
comYC	Streptococcus gordonii str. Challis substr. CH1	48.235	80.189	0.387
comGC/cglC	Streptococcus mitis SK321	47.126	82.075	0.387