Detailed information NTG0856143

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: QZH48_RS11530
• Genome accession: NZ_CP129879
• Coordinates: 2341703..2342086 (-)
• Length: 127 a.a.
• NCBI ID: WP_080739889.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain CAB701
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2336703..2347086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZH48_RS11490 (QZH48_11490)	-	2337238..2338047 (-)	810	WP_038602349.1	metal ABC transporter permease	-
QZH48_RS11495 (QZH48_11495)	-	2338040..2338777 (-)	738	WP_021723055.1	metal ABC transporter ATP-binding protein	-
QZH48_RS11500 (QZH48_11500)	-	2338955..2339797 (-)	843	WP_038602352.1	metal ABC transporter substrate-binding protein	-
QZH48_RS11505 (QZH48_11505)	-	2339794..2340231 (-)	438	WP_021721874.1	zinc-dependent MarR family transcriptional regulator	-
QZH48_RS11510 (QZH48_11510)	comGG	2340312..2340587 (-)	276	WP_021721873.1	hypothetical protein	Machinery gene
QZH48_RS11515 (QZH48_11515)	comGF	2340635..2341060 (-)	426	WP_161935055.1	competence type IV pilus minor pilin ComGF	Machinery gene
QZH48_RS11520 (QZH48_11520)	comGE	2341044..2341340 (-)	297	WP_038602356.1	competence type IV pilus minor pilin ComGE	Machinery gene
QZH48_RS11525 (QZH48_11525)	comGD	2341312..2341710 (-)	399	WP_301675732.1	competence type IV pilus minor pilin ComGD	Machinery gene
QZH48_RS11530 (QZH48_11530)	comGC	2341703..2342086 (-)	384	WP_080739889.1	competence type IV pilus major pilin ComGC	Machinery gene
QZH48_RS11535 (QZH48_11535)	comGB	2342100..2343173 (-)	1074	WP_080739890.1	competence type IV pilus assembly protein ComGB	Machinery gene
QZH48_RS11540 (QZH48_11540)	comGA	2343067..2344005 (-)	939	WP_058205111.1	competence type IV pilus ATPase ComGA	Machinery gene

Sequence

Protein

• Length: 127 a.a.
• Molecular weight: 14811.42 Da
• Isoelectric Point: 8.4538

>NTDB_id=856143 QZH48_RS11530 WP_080739889.1 2341703..2342086(-) (comGC) [Lactococcus lactis subsp. lactis strain CAB701]
MERTKKFILKKIQKIFLFVKICEKKCRQKELKAFTLIEMLIVLAIISILILLFVPNLIKEKSQVQKTGEAAVVKVVESQA
QLYEIDHDDEKPTLSELLSAGMITQKQISAYDNYYDQNKNEERNFND

Nucleotide

• Length: 384 bp

>NTDB_id=856143 QZH48_RS11530 WP_080739889.1 2341703..2342086(-) (comGC) [Lactococcus lactis subsp. lactis strain CAB701]
ATGGAAAGAACAAAGAAGTTTATTTTAAAGAAAATACAAAAAATATTTTTATTCGTTAAAATTTGTGAAAAAAAATGCCG
TCAGAAAGAGCTAAAAGCTTTTACTTTGATAGAGATGTTAATTGTACTAGCTATTATTAGTATTTTGATATTACTATTTG
TTCCAAATTTAATTAAAGAAAAATCACAAGTTCAAAAAACTGGAGAAGCGGCAGTTGTGAAAGTAGTAGAAAGTCAAGCT
CAACTTTATGAGATAGATCATGATGATGAGAAGCCGACTCTGTCAGAATTGCTCAGCGCTGGGATGATTACTCAAAAACA
AATTTCTGCTTACGATAATTACTATGATCAGAATAAAAATGAAGAACGAAATTTTAATGACTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (32-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Lactococcus lactis subsp. cremoris KW2	80.172	91.339	0.732
comYC	Streptococcus mutans UA159	55.446	79.528	0.441
comYC	Streptococcus mutans UA140	55.446	79.528	0.441
comYC	Streptococcus gordonii str. Challis substr. CH1	56.566	77.953	0.441
comGC/cglC	Streptococcus mitis SK321	54.455	79.528	0.433
comGC/cglC	Streptococcus pneumoniae TIGR4	52.475	79.528	0.417
comGC/cglC	Streptococcus pneumoniae Rx1	52.475	79.528	0.417
comGC/cglC	Streptococcus pneumoniae D39	52.475	79.528	0.417
comGC/cglC	Streptococcus pneumoniae R6	52.475	79.528	0.417
comGC/cglC	Streptococcus mitis NCTC 12261	56.18	70.079	0.394
comYC	Streptococcus suis isolate S10	56.818	69.291	0.394