Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | K5605_RS03930 | Genome accession | NZ_AP024313 |
| Coordinates | 836746..837174 (+) | Length | 142 a.a. |
| NCBI ID | WP_051121112.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain N1195 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 831746..842174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5605_RS03875 (N1195TP_07350) | - | 832266..832904 (-) | 639 | WP_000874710.1 | XRE family transcriptional regulator | - |
| K5605_RS03880 (N1195TP_07360) | - | 833094..833348 (+) | 255 | WP_001106625.1 | helix-turn-helix domain-containing protein | - |
| K5605_RS03885 (N1195TP_07370) | - | 833364..833525 (+) | 162 | WP_015978377.1 | hypothetical protein | - |
| K5605_RS03890 (N1195TP_07380) | - | 833518..833754 (-) | 237 | WP_021285963.1 | hypothetical protein | - |
| K5605_RS03895 (N1195TP_07390) | - | 833819..834544 (+) | 726 | WP_051121110.1 | BRO family protein | - |
| K5605_RS03900 (N1195TP_07400) | - | 834569..834778 (+) | 210 | WP_000455728.1 | hypothetical protein | - |
| K5605_RS03905 (N1195TP_07410) | - | 834791..834952 (+) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| K5605_RS03910 (N1195TP_07420) | - | 835047..835349 (+) | 303 | WP_031825443.1 | DUF2482 family protein | - |
| K5605_RS03915 (N1195TP_07430) | - | 835354..835614 (+) | 261 | WP_001836221.1 | DUF1108 family protein | - |
| K5605_RS03920 (N1195TP_07440) | - | 835629..836108 (+) | 480 | WP_051121111.1 | siphovirus Gp157 family protein | - |
| K5605_RS03925 (N1195TP_07450) | - | 836108..836746 (+) | 639 | WP_001043063.1 | ERF family protein | - |
| K5605_RS03930 (N1195TP_07460) | ssbA | 836746..837174 (+) | 429 | WP_051121112.1 | single-stranded DNA-binding protein | Machinery gene |
| K5605_RS03935 (N1195TP_07470) | - | 837188..837862 (+) | 675 | WP_140855189.1 | putative HNHc nuclease | - |
| K5605_RS03940 (N1195TP_07480) | - | 837969..838817 (-) | 849 | WP_112368115.1 | DUF4393 domain-containing protein | - |
| K5605_RS03945 (N1195TP_07490) | - | 838881..839642 (+) | 762 | WP_000132053.1 | conserved phage C-terminal domain-containing protein | - |
| K5605_RS03950 (N1195TP_07500) | - | 839655..840440 (+) | 786 | WP_000443352.1 | ATP-binding protein | - |
| K5605_RS03955 (N1195TP_07510) | - | 840437..840595 (+) | 159 | WP_183138517.1 | hypothetical protein | - |
| K5605_RS03960 (N1195TP_07520) | - | 840608..840829 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| K5605_RS03965 (N1195TP_07530) | - | 840839..841243 (+) | 405 | WP_000049777.1 | DUF1064 domain-containing protein | - |
| K5605_RS03970 (N1195TP_07540) | - | 841248..841433 (+) | 186 | WP_016028253.1 | DUF3113 family protein | - |
| K5605_RS03975 (N1195TP_07550) | - | 841434..841805 (+) | 372 | WP_183138518.1 | SA1788 family PVL leukocidin-associated protein | - |
| K5605_RS03980 (N1195TP_07560) | - | 841806..842054 (+) | 249 | WP_033859697.1 | phi PVL orf 51-like protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15946.62 Da Isoelectric Point: 8.4823
>NTDB_id=84650 K5605_RS03930 WP_051121112.1 836746..837174(+) (ssbA) [Staphylococcus aureus strain N1195]
MLNRAVLVGRLTKDPELRSTPNGLNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKDGRRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
MLNRAVLVGRLTKDPELRSTPNGLNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKDGRRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=84650 K5605_RS03930 WP_051121112.1 836746..837174(+) (ssbA) [Staphylococcus aureus strain N1195]
ATGTTAAACAGAGCAGTGTTAGTAGGCCGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGCCTAAATGTAGG
AACATTCACATTAGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCACTGGCAGGTGTAGACGGGCGATTACAAACACGC
AGTTACGATAACAAAGACGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
ATGTTAAACAGAGCAGTGTTAGTAGGCCGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGCCTAAATGTAGG
AACATTCACATTAGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCACTGGCAGGTGTAGACGGGCGATTACAAACACGC
AGTTACGATAACAAAGACGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.697 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
74.648 |
0.437 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.958 |
100 |
0.423 |
| ssbA | Streptococcus mutans UA159 |
41.549 |
100 |
0.415 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
39.437 |
100 |
0.394 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
39.437 |
100 |
0.394 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
38.732 |
100 |
0.387 |
| ssbB/cilA | Streptococcus mitis SK321 |
38.732 |
100 |
0.387 |