Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   U2W42_RS07435 Genome accession   NZ_CP140116
Coordinates   1449856..1450890 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain NV27     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1444856..1455890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2W42_RS07395 (U2W42_07395) - 1445182..1445337 (-) 156 WP_002988678.1 hypothetical protein -
  U2W42_RS07400 (U2W42_07400) - 1445663..1446013 (+) 351 WP_002988676.1 helix-turn-helix domain-containing protein -
  U2W42_RS07405 (U2W42_07405) - 1446027..1446410 (+) 384 WP_322475203.1 ImmA/IrrE family metallo-endopeptidase -
  U2W42_RS07410 (U2W42_07410) - 1446421..1446972 (+) 552 WP_002988670.1 hypothetical protein -
  U2W42_RS07415 (U2W42_07415) - 1447089..1448168 (+) 1080 WP_002988667.1 site-specific integrase -
  U2W42_RS07425 (U2W42_07425) trmB 1448366..1449001 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  U2W42_RS07430 (U2W42_07430) ccrZ 1449001..1449792 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  U2W42_RS07435 (U2W42_07435) pptB 1449856..1450890 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  U2W42_RS07440 (U2W42_07440) pptA 1450893..1451618 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  U2W42_RS07445 (U2W42_07445) - 1451690..1452109 (+) 420 WP_002983376.1 HIT family protein -
  U2W42_RS07450 (U2W42_07450) - 1452106..1452462 (+) 357 WP_002988657.1 hypothetical protein -
  U2W42_RS07455 (U2W42_07455) brpA 1452573..1453847 (-) 1275 WP_010922584.1 biofilm formation/cell division transcriptional regulator BrpA -
  U2W42_RS07460 (U2W42_07460) - 1453856..1454380 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  U2W42_RS07465 (U2W42_07465) tsaE 1454355..1454816 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=833549 U2W42_RS07435 WP_010922583.1 1449856..1450890(-) (pptB) [Streptococcus pyogenes strain NV27]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=833549 U2W42_RS07435 WP_010922583.1 1449856..1450890(-) (pptB) [Streptococcus pyogenes strain NV27]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427