Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | QAO71_RS09145 | Genome accession | NZ_CP123445 |
| Coordinates | 1964607..1964891 (-) | Length | 94 a.a. |
| NCBI ID | WP_036989606.1 | Uniprot ID | A0A031MIR7 |
| Organism | Halopseudomonas sp. SMJS2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1959607..1969891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO71_RS09120 (QAO71_09120) | - | 1959643..1961001 (-) | 1359 | WP_051610815.1 | YcjX family protein | - |
| QAO71_RS09125 (QAO71_09125) | - | 1961069..1961470 (+) | 402 | WP_036989612.1 | TM2 domain-containing protein | - |
| QAO71_RS09130 (QAO71_09130) | - | 1961471..1961764 (-) | 294 | WP_074778477.1 | YcgL domain-containing protein | - |
| QAO71_RS09135 (QAO71_09135) | rnd | 1961761..1962888 (-) | 1128 | WP_280165672.1 | ribonuclease D | - |
| QAO71_RS09140 (QAO71_09140) | - | 1963124..1964563 (+) | 1440 | WP_036989607.1 | methyl-accepting chemotaxis protein | - |
| QAO71_RS09145 (QAO71_09145) | comE1/comEA | 1964607..1964891 (-) | 285 | WP_036989606.1 | ComEA family DNA-binding protein | Machinery gene |
| QAO71_RS09150 (QAO71_09150) | - | 1965144..1966148 (+) | 1005 | WP_036989605.1 | response regulator | - |
| QAO71_RS09155 (QAO71_09155) | - | 1966174..1967148 (+) | 975 | WP_280164204.1 | diguanylate cyclase | - |
| QAO71_RS09160 (QAO71_09160) | - | 1967172..1968389 (-) | 1218 | WP_280164205.1 | O-succinylhomoserine sulfhydrylase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 9888.41 Da Isoelectric Point: 4.3355
>NTDB_id=821136 QAO71_RS09145 WP_036989606.1 1964607..1964891(-) (comE1/comEA) [Halopseudomonas sp. SMJS2]
MKNILAAVILCLTAWSVVPAFAEIPAEPLVTVNINNASAAEIAETLNGIGLAKAEAIVAYREENGGFESVDQLTVVKGIG
PATIDKNRERIALQ
MKNILAAVILCLTAWSVVPAFAEIPAEPLVTVNINNASAAEIAETLNGIGLAKAEAIVAYREENGGFESVDQLTVVKGIG
PATIDKNRERIALQ
Nucleotide
Download Length: 285 bp
>NTDB_id=821136 QAO71_RS09145 WP_036989606.1 1964607..1964891(-) (comE1/comEA) [Halopseudomonas sp. SMJS2]
ATGAAAAATATTCTTGCTGCCGTCATCCTCTGTCTGACCGCCTGGTCTGTGGTACCTGCGTTCGCGGAAATCCCTGCTGA
ACCGCTGGTGACAGTCAACATCAACAATGCCAGCGCTGCGGAAATAGCCGAGACCCTGAACGGTATCGGTCTGGCCAAGG
CAGAGGCCATTGTTGCCTATCGGGAAGAGAACGGCGGATTCGAATCGGTTGACCAACTTACCGTGGTCAAGGGAATCGGC
CCTGCTACCATCGACAAGAACCGCGAGCGAATTGCGTTGCAGTGA
ATGAAAAATATTCTTGCTGCCGTCATCCTCTGTCTGACCGCCTGGTCTGTGGTACCTGCGTTCGCGGAAATCCCTGCTGA
ACCGCTGGTGACAGTCAACATCAACAATGCCAGCGCTGCGGAAATAGCCGAGACCCTGAACGGTATCGGTCTGGCCAAGG
CAGAGGCCATTGTTGCCTATCGGGAAGAGAACGGCGGATTCGAATCGGTTGACCAACTTACCGTGGTCAAGGGAATCGGC
CCTGCTACCATCGACAAGAACCGCGAGCGAATTGCGTTGCAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.545 |
100 |
0.521 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
49.485 |
100 |
0.511 |
| comEA | Vibrio campbellii strain DS40M4 |
46.067 |
94.681 |
0.436 |
| comEA | Vibrio cholerae C6706 |
61.538 |
69.149 |
0.426 |
| comEA | Vibrio cholerae strain A1552 |
61.538 |
69.149 |
0.426 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.73 |
67.021 |
0.394 |
| comEA | Legionella pneumophila strain ERS1305867 |
37.5 |
100 |
0.383 |
| comEA | Acinetobacter baylyi ADP1 |
56.25 |
68.085 |
0.383 |
| comEA | Legionella pneumophila str. Paris |
37.5 |
100 |
0.383 |
| comE | Neisseria gonorrhoeae MS11 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
56.452 |
65.957 |
0.372 |