Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO26_RS14645 | Genome accession | NZ_CP123077 |
| Coordinates | 2910597..2911022 (+) | Length | 141 a.a. |
| NCBI ID | WP_000934384.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA60 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2905597..2916022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO26_RS14580 (QAO26_14605) | - | 2905642..2905884 (+) | 243 | WP_000639923.1 | DUF739 family protein | - |
| QAO26_RS14585 (QAO26_14610) | - | 2905897..2906157 (+) | 261 | WP_000435341.1 | transcriptional regulator | - |
| QAO26_RS14590 (QAO26_14615) | - | 2906181..2906719 (-) | 539 | Protein_2838 | hypothetical protein | - |
| QAO26_RS14595 (QAO26_14620) | - | 2906776..2907531 (+) | 756 | WP_001148341.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO26_RS14600 (QAO26_14625) | - | 2907548..2907688 (+) | 141 | WP_000939500.1 | hypothetical protein | - |
| QAO26_RS14605 (QAO26_14630) | - | 2907703..2908335 (-) | 633 | WP_001814660.1 | hypothetical protein | - |
| QAO26_RS14610 (QAO26_14635) | - | 2908391..2908717 (+) | 327 | WP_001025595.1 | hypothetical protein | - |
| QAO26_RS14615 (QAO26_14640) | - | 2908714..2908813 (+) | 100 | Protein_2843 | hypothetical protein | - |
| QAO26_RS14620 (QAO26_14645) | - | 2908962..2909225 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| QAO26_RS14625 (QAO26_14650) | - | 2909237..2909398 (+) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| QAO26_RS14630 (QAO26_14655) | - | 2909490..2909750 (+) | 261 | WP_000291076.1 | DUF1108 family protein | - |
| QAO26_RS14635 (QAO26_14660) | - | 2909760..2909981 (+) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| QAO26_RS14640 (QAO26_14665) | - | 2909974..2910597 (+) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO26_RS14645 (QAO26_14670) | ssbA | 2910597..2911022 (+) | 426 | WP_000934384.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO26_RS14650 (QAO26_14675) | - | 2911033..2911584 (+) | 552 | WP_001004506.1 | NUMOD4 domain-containing protein | - |
| QAO26_RS14655 (QAO26_14680) | - | 2911585..2912259 (+) | 675 | WP_015445893.1 | putative HNHc nuclease | - |
| QAO26_RS14660 (QAO26_14685) | - | 2912252..2913007 (+) | 756 | WP_001037657.1 | DnaD domain protein | - |
| QAO26_RS14665 (QAO26_14690) | - | 2913007..2913363 (+) | 357 | WP_001132243.1 | hypothetical protein | - |
| QAO26_RS14670 (QAO26_14695) | - | 2913360..2914601 (+) | 1242 | WP_015445891.1 | DnaB helicase C-terminal domain-containing protein | - |
| QAO26_RS14675 (QAO26_14700) | - | 2914598..2914813 (+) | 216 | WP_001024405.1 | hypothetical protein | - |
| QAO26_RS14680 (QAO26_14705) | - | 2914817..2915038 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO26_RS14685 (QAO26_14710) | - | 2915048..2915473 (+) | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| QAO26_RS14690 (QAO26_14715) | - | 2915470..2915874 (+) | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15784.48 Da Isoelectric Point: 8.4826
>NTDB_id=818279 QAO26_RS14645 WP_000934384.1 2910597..2911022(+) (ssbA) [Staphylococcus aureus strain SW-MRSA60]
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=818279 QAO26_RS14645 WP_000934384.1 2910597..2911022(+) (ssbA) [Staphylococcus aureus strain SW-MRSA60]
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
73.729 |
83.688 |
0.617 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.844 |
100 |
0.418 |
| ssbA | Streptococcus mutans UA159 |
46.087 |
81.56 |
0.376 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.068 |
83.688 |
0.369 |