Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO26_RS09000 | Genome accession | NZ_CP123077 |
| Coordinates | 1757597..1758022 (-) | Length | 141 a.a. |
| NCBI ID | WP_015978401.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA60 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1752597..1763022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO26_RS08950 (QAO26_08960) | - | 1752638..1752997 (-) | 360 | WP_031895324.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO26_RS08955 (QAO26_08965) | - | 1752998..1753183 (-) | 186 | WP_001187264.1 | DUF3113 family protein | - |
| QAO26_RS08960 (QAO26_08970) | - | 1753183..1753590 (-) | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO26_RS08965 (QAO26_08975) | - | 1753600..1753821 (-) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO26_RS08970 (QAO26_08980) | - | 1753834..1753992 (-) | 159 | WP_000256596.1 | hypothetical protein | - |
| QAO26_RS08975 (QAO26_08985) | - | 1753986..1754765 (-) | 780 | WP_000803062.1 | ATP-binding protein | - |
| QAO26_RS08980 (QAO26_08990) | - | 1754775..1755545 (-) | 771 | WP_000190223.1 | conserved phage C-terminal domain-containing protein | - |
| QAO26_RS08985 (QAO26_08995) | - | 1755591..1756250 (+) | 660 | WP_016028252.1 | hypothetical protein | - |
| QAO26_RS08990 (QAO26_09000) | - | 1756360..1757034 (-) | 675 | WP_411888871.1 | putative HNHc nuclease | - |
| QAO26_RS08995 (QAO26_09005) | - | 1757035..1757586 (-) | 552 | WP_031927924.1 | NUMOD4 domain-containing protein | - |
| QAO26_RS09000 (QAO26_09010) | ssbA | 1757597..1758022 (-) | 426 | WP_015978401.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO26_RS09005 (QAO26_09015) | - | 1758022..1758645 (-) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO26_RS09010 (QAO26_09020) | - | 1758638..1758859 (-) | 222 | WP_000815400.1 | DUF2483 family protein | - |
| QAO26_RS09015 (QAO26_09025) | - | 1758869..1759129 (-) | 261 | WP_000291089.1 | DUF1108 family protein | - |
| QAO26_RS09020 (QAO26_09030) | - | 1759223..1759384 (-) | 162 | WP_000066026.1 | DUF1270 family protein | - |
| QAO26_RS09025 (QAO26_09035) | - | 1759377..1759514 (-) | 138 | WP_000230552.1 | hypothetical protein | - |
| QAO26_RS09030 (QAO26_09040) | - | 1759564..1759794 (+) | 231 | WP_000395457.1 | hypothetical protein | - |
| QAO26_RS09035 (QAO26_09045) | - | 1759769..1759945 (-) | 177 | WP_001094935.1 | hypothetical protein | - |
| QAO26_RS09040 (QAO26_09050) | - | 1759961..1760713 (-) | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO26_RS09045 (QAO26_09055) | - | 1760715..1760900 (-) | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| QAO26_RS09050 (QAO26_09060) | - | 1761340..1761549 (+) | 210 | WP_000642492.1 | hypothetical protein | - |
| QAO26_RS09055 (QAO26_09065) | - | 1761539..1761682 (-) | 144 | WP_000939498.1 | hypothetical protein | - |
| QAO26_RS09060 (QAO26_09070) | - | 1761697..1762140 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| QAO26_RS09065 (QAO26_09075) | - | 1762158..1762382 (-) | 225 | WP_000333485.1 | DUF739 family protein | - |
| QAO26_RS09070 (QAO26_09080) | - | 1762544..1762924 (+) | 381 | WP_411888872.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15947.45 Da Isoelectric Point: 5.8790
>NTDB_id=818266 QAO26_RS09000 WP_015978401.1 1757597..1758022(-) (ssbA) [Staphylococcus aureus strain SW-MRSA60]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=818266 QAO26_RS09000 WP_015978401.1 1757597..1758022(-) (ssbA) [Staphylococcus aureus strain SW-MRSA60]
ATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
74.576 |
83.688 |
0.624 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.553 |
100 |
0.426 |
| ssbA | Streptococcus mutans UA159 |
41.844 |
100 |
0.418 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
45.763 |
83.688 |
0.383 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
45.763 |
83.688 |
0.383 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.915 |
83.688 |
0.376 |