Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO35_RS14345 | Genome accession | NZ_CP123074 |
| Coordinates | 2848333..2848758 (-) | Length | 141 a.a. |
| NCBI ID | WP_015978401.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA61 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2843333..2853758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO35_RS14295 (QAO35_14330) | - | 2843374..2843733 (-) | 360 | WP_031895324.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO35_RS14300 (QAO35_14335) | - | 2843734..2843919 (-) | 186 | WP_001187264.1 | DUF3113 family protein | - |
| QAO35_RS14305 (QAO35_14340) | - | 2843919..2844326 (-) | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO35_RS14310 (QAO35_14345) | - | 2844336..2844557 (-) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO35_RS14315 (QAO35_14350) | - | 2844570..2844728 (-) | 159 | WP_000256596.1 | hypothetical protein | - |
| QAO35_RS14320 (QAO35_14355) | - | 2844722..2845501 (-) | 780 | WP_000803062.1 | ATP-binding protein | - |
| QAO35_RS14325 (QAO35_14360) | - | 2845511..2846281 (-) | 771 | WP_000190223.1 | conserved phage C-terminal domain-containing protein | - |
| QAO35_RS14330 (QAO35_14365) | - | 2846327..2846986 (+) | 660 | WP_016028252.1 | hypothetical protein | - |
| QAO35_RS14335 (QAO35_14370) | - | 2847096..2847770 (-) | 675 | WP_411888871.1 | putative HNHc nuclease | - |
| QAO35_RS14340 (QAO35_14375) | - | 2847771..2848322 (-) | 552 | WP_031927924.1 | NUMOD4 domain-containing protein | - |
| QAO35_RS14345 (QAO35_14380) | ssbA | 2848333..2848758 (-) | 426 | WP_015978401.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO35_RS14350 (QAO35_14385) | - | 2848758..2849381 (-) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO35_RS14355 (QAO35_14390) | - | 2849374..2849595 (-) | 222 | WP_000815400.1 | DUF2483 family protein | - |
| QAO35_RS14360 (QAO35_14395) | - | 2849605..2849865 (-) | 261 | WP_000291089.1 | DUF1108 family protein | - |
| QAO35_RS14365 (QAO35_14400) | - | 2849959..2850120 (-) | 162 | WP_000066026.1 | DUF1270 family protein | - |
| QAO35_RS14370 (QAO35_14405) | - | 2850113..2850250 (-) | 138 | WP_000230552.1 | hypothetical protein | - |
| QAO35_RS14375 (QAO35_14410) | - | 2850300..2850530 (+) | 231 | WP_000395457.1 | hypothetical protein | - |
| QAO35_RS14380 (QAO35_14415) | - | 2850505..2850681 (-) | 177 | WP_001094935.1 | hypothetical protein | - |
| QAO35_RS14385 (QAO35_14420) | - | 2850697..2851449 (-) | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO35_RS14390 (QAO35_14425) | - | 2851451..2851636 (-) | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS14395 (QAO35_14430) | - | 2852076..2852285 (+) | 210 | WP_000642492.1 | hypothetical protein | - |
| QAO35_RS14400 (QAO35_14435) | - | 2852275..2852418 (-) | 144 | WP_000939498.1 | hypothetical protein | - |
| QAO35_RS14405 (QAO35_14440) | - | 2852433..2852876 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| QAO35_RS14410 (QAO35_14445) | - | 2852893..2853117 (-) | 225 | WP_000333485.1 | DUF739 family protein | - |
| QAO35_RS14415 (QAO35_14450) | - | 2853279..2853659 (+) | 381 | WP_411888872.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15947.45 Da Isoelectric Point: 5.8790
>NTDB_id=818234 QAO35_RS14345 WP_015978401.1 2848333..2848758(-) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=818234 QAO35_RS14345 WP_015978401.1 2848333..2848758(-) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
ATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
74.576 |
83.688 |
0.624 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.553 |
100 |
0.426 |
| ssbA | Streptococcus mutans UA159 |
41.844 |
100 |
0.418 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
45.763 |
83.688 |
0.383 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
45.763 |
83.688 |
0.383 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.915 |
83.688 |
0.376 |