Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO35_RS10270 | Genome accession | NZ_CP123074 |
| Coordinates | 2070952..2071377 (-) | Length | 141 a.a. |
| NCBI ID | WP_000934384.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SW-MRSA61 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2065952..2076377
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO35_RS10225 (QAO35_10255) | - | 2066100..2066504 (-) | 405 | WP_031895320.1 | DUF1064 domain-containing protein | - |
| QAO35_RS10230 (QAO35_10260) | - | 2066501..2066926 (-) | 426 | WP_000451861.1 | phage N-6-adenine-methyltransferase | - |
| QAO35_RS10235 (QAO35_10265) | - | 2066936..2067157 (-) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| QAO35_RS10240 (QAO35_10270) | - | 2067161..2067376 (-) | 216 | WP_001024405.1 | hypothetical protein | - |
| QAO35_RS10245 (QAO35_10275) | - | 2067373..2068614 (-) | 1242 | WP_015445891.1 | DnaB helicase C-terminal domain-containing protein | - |
| QAO35_RS10250 (QAO35_10280) | - | 2068611..2068967 (-) | 357 | WP_001132243.1 | hypothetical protein | - |
| QAO35_RS10255 (QAO35_10285) | - | 2068967..2069722 (-) | 756 | WP_001037657.1 | DnaD domain protein | - |
| QAO35_RS10260 (QAO35_10290) | - | 2069715..2070389 (-) | 675 | WP_015445893.1 | putative HNHc nuclease | - |
| QAO35_RS10265 (QAO35_10295) | - | 2070390..2070941 (-) | 552 | WP_001004506.1 | NUMOD4 domain-containing protein | - |
| QAO35_RS10270 (QAO35_10300) | ssbA | 2070952..2071377 (-) | 426 | WP_000934384.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO35_RS10275 (QAO35_10305) | - | 2071377..2072000 (-) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| QAO35_RS10280 (QAO35_10310) | - | 2071993..2072214 (-) | 222 | WP_000815403.1 | DUF2483 family protein | - |
| QAO35_RS10285 (QAO35_10315) | - | 2072224..2072484 (-) | 261 | WP_000291076.1 | DUF1108 family protein | - |
| QAO35_RS10290 (QAO35_10320) | - | 2072576..2072737 (-) | 162 | WP_001668917.1 | DUF1270 family protein | - |
| QAO35_RS10295 (QAO35_10325) | - | 2072730..2072867 (-) | 138 | WP_000230552.1 | hypothetical protein | - |
| QAO35_RS10300 (QAO35_10330) | - | 2072917..2073147 (+) | 231 | WP_000395457.1 | hypothetical protein | - |
| QAO35_RS10305 (QAO35_10335) | - | 2073122..2073298 (-) | 177 | WP_001094935.1 | hypothetical protein | - |
| QAO35_RS10310 (QAO35_10340) | - | 2073314..2074066 (-) | 753 | WP_023487064.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO35_RS10315 (QAO35_10345) | - | 2074068..2074253 (-) | 186 | WP_000933363.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS10320 (QAO35_10350) | - | 2074693..2074902 (+) | 210 | WP_000642492.1 | hypothetical protein | - |
| QAO35_RS10325 (QAO35_10355) | - | 2074892..2075035 (-) | 144 | WP_000939498.1 | hypothetical protein | - |
| QAO35_RS10330 (QAO35_10360) | - | 2075050..2075493 (-) | 444 | WP_023487065.1 | hypothetical protein | - |
| QAO35_RS10335 (QAO35_10365) | - | 2075506..2075754 (-) | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| QAO35_RS10340 (QAO35_10370) | - | 2075918..2076241 (+) | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15784.48 Da Isoelectric Point: 8.4826
>NTDB_id=818226 QAO35_RS10270 WP_000934384.1 2070952..2071377(-) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNNADSIEDLPF
Nucleotide
Download Length: 426 bp
>NTDB_id=818226 QAO35_RS10270 WP_000934384.1 2070952..2071377(-) (ssbA) [Staphylococcus aureus strain SW-MRSA61]
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGATTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
73.729 |
83.688 |
0.617 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
75.177 |
0.44 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
41.844 |
100 |
0.418 |
| ssbA | Streptococcus mutans UA159 |
46.087 |
81.56 |
0.376 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.915 |
83.688 |
0.376 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
44.068 |
83.688 |
0.369 |
| ssbB/cilA | Streptococcus mitis SK321 |
44.068 |
83.688 |
0.369 |